KEGG   Aeromonas rivipollensis: C7N77_10110
Entry
C7N77_10110       CDS       T05453                                 
Name
(GenBank) exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
arv  Aeromonas rivipollensis
Brite
KEGG Orthology (KO) [BR:arv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:arv03400]
    C7N77_10110
DNA repair and recombination proteins [BR:arv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     C7N77_10110
    Archaeal homologous recombinant proteins
     C7N77_10110
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 ABC_ATPase ABC_tran nSTAND3 MMR_HSR1 AAA_22 DUF87
Other DBs
NCBI-ProteinID: AVP93514
LinkDB
Position
2115352..2119104
AA seq 1250 aa
MKILSLAGENLASLTGAFTIDFAGGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPR
FIANRKHVAEVGRADDEEKLKANDVRGILSRGHASGYAEVQFRSCDGRIYLARWAVRRAR
NRSEGRFQAQERSLTDVESGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFL
KSSADERSALLERMTGTELYSAISIQTHERARAEQQALATIQQRLGDVALMDDETREHWV
ARQLSLSTSLKHEQQQRQLLQDLRDLNGRIAAQLQACREGQEALAAAEAAHGEAASGREE
FARAEQAQVARADHDELARLTLEVQQQELQIGQLAPQLEQVEPVLQQAALREQQLLADKI
AAEREWGALQPELKRAQELDTRLKEKGQQLQETRQQGTQARALQLALQQEWQQQASRVEA
LTVRRQQWALWLEERKALAPLARQWQPLLAAIQDWAADRELLQRVLQSREHKGHALRDLA
SRLEQGQQERDYWQQERTRLQQLHDELQAQEWDAEVARAQEQRQAQTEQLARIRQLLELA
QAGRNHSEQQERLQQEMTLLEQHLARLKAQHEELAPALARLATQRGEARHALEQARAVAS
FEQYRHVLSDGTPCPLCGAEEHPYTRSQPQVAGILAQLAERVRQLDLEWEQLNHQHIQGK
SERVELARQLVARQQHQPELEARSEQMVQRWLQLGGDALLGQGLPLRQSPAQWTELLARL
LAQGEALESDLVAGQRRLQQAQQGQQRLLGLRSQLTELTARHQQFEQQWQEAERQKIEWE
AELKALAEQEASLRQRLALGEARLDEQMGAEPWRQWLGSRQWQEWQQTCEEYLRGQSEWE
QLGGELATLTPALSAQEARVQSQNELLHKLERDYKDHEQQRQGLLASREACLGGRAIALV
EQEWQQRLQLVASQLEEAVTALRVAREKQTELKARLTHLEQDRQVSSRRRREALGRWAAH
SGTLGIAEYDLRRLLAITPEELRARRTALQRLDDALAEARTRLTERQRALAQEEGKLARY
REHHGELAALTAEALAERLGACEARCGELEEQLFQCKSTLAQAEAAALKAGSLQEALAAQ
QAVADHWLQLSELIGSASGAKLRTFAQSLTLERLLLEANAQLGELSPRYRLERVPGTDLA
LQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDS
LDLALSSLDSLQAAGRQIGVISHVQTLVERIGVQIRVEALGGGESRVVLP
NT seq 3753 nt   +upstreamnt  +downstreamnt
atgaaaatcttgtctcttgcaggggaaaacctggccagcctgaccggcgctttcaccatc
gacttcgcaggtggcgctttgggggctgccgggctctttgccatcacgggcaacacgggc
gcgggcaagagcacattgctcgacgctatctgtctcgctctctatgacgagatgccgcgc
tttatcgccaatcgcaagcacgtggccgaagtgggcagggctgatgacgaggagaagctc
aaggccaatgacgtgcgcggcattctcagccgcggccacgccagcggctatgccgaggtg
cagttccgcagctgtgacggccgcatctacctggcgcgctgggcggtgcggcgggcacgc
aatcgctcggaggggcgctttcaggcccaggagcgcagcctgaccgacgtcgagtcgggg
caggtcttctccggcagcaagcgggagctgcaggatcgcatcgacgagctggtgggcctc
tcctgggagcagttccgccgcgcagtgatactgccgcaaggggagtttgccgccttcctc
aagtcgagcgccgatgagcgctccgccctgctcgagcggatgacgggcaccgagctctac
tccgccatctccatccagacccatgagcgggcgcgggccgaacagcaggcgctggcgacc
atacagcagcggctcggcgacgtggccctgatggacgacgagacacgcgagcactgggtc
gcccggcagctgagcctctccaccagcctcaagcacgaacagcagcagcgtcagctgttg
caggacttgcgggatctcaacgggcggattgcagcccagttgcaggcctgccgggagggg
caggaggcgctggccgccgccgaggcggcccatggcgaggcggcgtccgggcgggaagag
tttgcccgcgccgaacaggcccaggtggcccgcgccgatcacgacgaactcgcccgcctc
accctggaggtgcagcagcaggagctgcagataggccagcttgccccccagctggagcaa
gttgaacctgtgttgcagcaggccgcgctgcgcgagcagcaactgctggccgacaagatt
gccgccgagcgggagtggggcgccctgcaacccgagctcaagcgggcgcaggagctcgat
acccggctcaaggagaagggccagcagttgcaggagacccggcagcaggggacccaggca
cgggccctgcaactggcgctgcagcaggagtggcagcagcaggcgagtcgggtcgaggcc
ctgacggtgcgccgtcagcagtgggctctctggctcgaggagcgcaaggccttggccccg
ctggcgcgccagtggcagcctttgctggcggccatccaggactgggcggcggacagggag
ttgttgcaacgggtgctgcaaagccgtgagcacaagggccatgccctgcgggatcttgcc
agccggctggagcaggggcagcaggagcgcgactactggcagcaggagcgcacccgattg
caacagctgcacgatgagctgcaggcgcaggagtgggacgccgaggtagccagggcgcag
gagcagcgtcaggcccagacagagcaactggcccggattcgccaactgctggagctggcc
caggcgggccgcaaccacagcgagcagcaggagcggttgcagcaggagatgacgctgctc
gagcagcatcttgcccggctgaaggcccagcatgaggagctggctccggcgctggcgcgg
ctcgccacccagcgcggcgaggcgcgccatgccctggagcaggcccgcgccgtggccagc
ttcgagcagtatcgccacgtgttgagcgatggcacgccctgcccgctctgcggcgccgag
gagcatccctacacccggagccagccccaggtggccgggatactggcgcaactggccgag
cgtgtccgccagctggatctggagtgggagcagctcaaccatcagcatattcaggggaag
agcgagcgggtcgagctggcgcgtcagctggtcgcccgtcagcagcatcaacccgagctg
gaggcgcgctccgagcagatggtccagcgctggctgcaactgggaggggatgccctgctg
gggcaggggctgcccttgcggcaaagcccggcgcagtggaccgagctgctggctcgcctg
ctggcgcagggggaggctctggagtcggatctcgtggccgggcagcgacgactgcagcag
gcccagcaggggcagcagaggctgctggggctgcgcagccagctgaccgagctgaccgcc
cgccatcagcagtttgagcagcagtggcaggaagccgagcggcagaagattgagtgggag
gccgagctgaaggcgctggccgagcaggaggcgtcactgcgccaacgcctggcactgggg
gaggcccgtctcgatgaacagatgggggccgagccctggcgccagtggcttggcagccga
caatggcaggagtggcagcagacctgcgaggagtatctgcgcggacagagcgaatgggag
cagctagggggtgagctggccactctgaccccggccctgagcgcccaggaggcgcgggta
cagagccagaacgagctgctgcacaagctggagcgcgactacaaggatcatgagcagcag
cgtcaggggttgctcgccagccgggaagcctgcctcggaggccgtgccatcgccctggtc
gagcaggagtggcagcagcggctgcaactggtggccagtcagctcgaggaggcggtgacc
gcgctgcgggtcgcccgggagaagcagaccgagctcaaggccaggttgacccatctcgag
caggacaggcaggtgagcagccgtcgtcgccgcgaggcgctggggcgctgggcggcccat
tccggcaccctcggcatcgccgaatatgatctgcgtcggctgttggccatcacgccggag
gagctcagggctcgccgcaccgccttgcagcgtctggacgatgccctggccgaggcccgc
acccggctgaccgagcgtcagcgggcgctggctcaggaggagggcaagctggcgcgctat
cgggagcatcatggggagctggccgccctcacggccgaggcccttgccgagcgtctgggg
gcctgcgaggcccgctgcggcgagctggaagagcagttgttccagtgcaagagcaccctg
gctcaggccgaggcggcggcgctgaaggcggggagcctgcaggaggcgctggccgcccag
caggcggtggcggatcactggctgcaactgtccgagcttatcggctccgccagcggcgcc
aagctgcgtaccttcgcccagagcctcacgctcgaacgtctattgttggaggccaatgcc
cagctcggcgaactgtcgccgcgttatcggctggagcgggtgcccggcacggatctggcg
ctgcaggtggtggatctggacatgggggacgaggtgcggtctgtggactccctctccggc
ggcgagagcttcctggtgtcgctggcgctggcgctggccctctccagcctctcctcccgt
cagacccaggtcgaatcgctgttcatcgacgaggggtttggcaccctggatccggacagc
ctggatctggcgctctccagtctggactccctgcaggcggccggccgccagatcggggtc
atctcccacgttcagaccctggtggagcggatcggcgtgcagatccgggtcgaagccctc
ggcggtggcgagagccgggtggtcttgccctga

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