Aeromonas rivipollensis: C7N77_14465
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Entry
C7N77_14465 CDS
T05453
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
arv
Aeromonas rivipollensis
Brite
KEGG Orthology (KO) [BR:
arv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arv03016
]
C7N77_14465 (rnd)
Enzymes [BR:
arv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C7N77_14465 (rnd)
Transfer RNA biogenesis [BR:
arv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C7N77_14465 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
AVP94263
UniProt:
A0AAW9YFN9
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All DBs
Position
complement(3122602..3123714)
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AA seq
370 aa
AA seq
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MQYQLISQQAELEQYLASLADVPLAIDTEFVRTRTYYPQLGLFQIYDGERLALLDPLTLD
LSGLWQRLGRAGQIAILHASGEDLELIQHQAGHLPNQMHDTQLATAFLGYGVSVGFGALV
KEFLGVELEKDQARTDWLARPLTARQLEYAAADVFYLMPLYEKVMARLHESGKFAWFEQE
CQNHSARKTQGSDPRQAYLEIINAWQLGRRELAILRELAAWRQQEAVRRDLALNFVVKEL
HLFKVAERRPTSLRDLNELGLAPIEIKIHGKRMLDIVAAAQQSDPEGWPEPIRRLVDYPQ
YKAELKRIKAMVEEKAKASNIPPELVASKKIIHQYFTWSWRMSAEERARADKPMLLQGWR
HELVGHLLAQ
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatcaactcatttcacagcaagccgaactggagcagtatctcgcttccctggcc
gacgttcccctggccatagataccgaattcgttcgcacccgtacctactatccccagctc
ggtctgttccagatctatgacggcgaacgcctcgccctgctggatcccctgaccctggat
ctctcggggctgtggcagcggctcgggcgggcagggcagatcgccatactgcacgcctcg
ggtgaagatctggagctcattcagcatcaggcgggccacctgcccaaccagatgcacgac
acccagctcgcgacggcatttctgggttacggcgtatcggtcggcttcggcgccctggtc
aaggagttcctcggcgtggagctggaaaaggatcaggcccgcaccgactggctggcccgt
cccctgaccgcgcgccagctcgagtatgcggcggcggatgtcttctacctgatgcccctc
tacgagaaggtgatggccaggctgcacgagagcggcaagtttgcctggttcgagcaggag
tgccagaaccactccgcccgcaagacccagggcagcgatccccgtcaggcctacctcgag
atcatcaacgcctggcaactgggtcggcgcgagctggccattctgcgcgagctcgccgcc
tggcgtcagcaagaggcggtgcgccgggatctggctctcaacttcgtggtcaaggagttg
cacctgttcaaggtggcggagcgtcggcccacttcattacgggatctcaacgagctgggg
ctggcccccatcgagatcaagatccacggcaagcggatgctggacatagtcgcggcggcc
cagcagagcgaccccgaaggttggcccgagcccattcgtcgactggtggattacccccag
tacaaggccgagctcaaacgcatcaaggccatggtggaagagaaggccaaggccagcaac
atcccgcctgagctggtggccagcaagaagatcatccaccagtacttcacctggagctgg
cggatgagcgccgaggagcgcgcccgcgccgacaagcccatgctgctgcaaggctggcgt
catgagctggtggggcatctgctggcccagtaa
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