Aeromonas rivipollensis: C7N77_15935
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Entry
C7N77_15935 CDS
T05453
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
arv
Aeromonas rivipollensis
Pathway
arv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C7N77_15935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arv03400
]
C7N77_15935
Enzymes [BR:
arv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
C7N77_15935
DNA repair and recombination proteins [BR:
arv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
C7N77_15935
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C7N77_15935
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C7N77_15935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
WSS_VP
MIOS_WD40
Motif
Other DBs
NCBI-ProteinID:
AVP94516
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All DBs
Position
3462164..3463591
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AA seq
475 aa
AA seq
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MSKTAQPGSEPTFYFHDYETFGISPARDRPSQFAGIRTDADFNIIGEPLVIYCKPPADYL
PEPEACLITGITPQKAMKDGLCEADFIRQIHEQFATPNTCVLGYNSIRFDDEVTRYTLYR
NFYDPYAYAWQNGNSRWDILDMLRACYALRPEGIEWALDDEGKPSFKLERLTVANGVAHA
NAHDALSDVLATIEMAKLVKKAQPKLFDYLFALRNKNKVKALIDVVTMKPLVHVSGMFSP
WQGCASWVSPLAWHPTNQNAVIMVDLTRDPTPLIELTSEEIRERLYTRKDDLGDLAAIPV
KLVHINKCPVLAPAATLTPERADQLGIDREQCRKSLDLLRAHPEVREKLVEVFNQEFAGS
NDSDPDTQLYAGFFGHGDKSTMDLVRATPADLLGEREFAFTDSRLPEMLFRYRARNWPHT
LSEAEQKRWRLHCSDYFSRRLPDYVPRLEALAEQNQGNERNFAILKSLYHYLEDL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacagcacagcccggcagcgagcccactttctacttccacgattacgagacc
ttcggcatcagccccgccagggacaggccgtcgcagtttgcgggcattcgcaccgacgcc
gatttcaacatcatcggcgagccgctggtgatctattgcaagccgccggcggactacctg
ccggagccggaagcctgtctcatcaccggcatcacgccgcagaaggcgatgaaggacggg
ctctgcgaggcggatttcattcgccaaattcacgagcagttcgccaccccgaacacctgc
gtgctgggctacaacagcatccgcttcgatgatgaagtgacccgctacaccctctatcgc
aacttctatgacccctacgcctacgcctggcagaacggcaactcccgctgggacattctc
gacatgctgcgggcctgctacgccctgcgccccgaggggatagagtgggccctcgacgac
gagggcaagccgagcttcaagctggagagactgacggtggccaacggcgtggcccacgcc
aacgcccacgatgcgctctccgacgtcttggccaccatagagatggccaagctggtgaaa
aaggcccagcccaagctgtttgactacctgtttgccctgcgcaacaagaacaaggtgaag
gcgctcatcgacgtggtgaccatgaagcccctggtccacgtctccggcatgttctccccc
tggcaggggtgcgcaagctgggtgtcgccgctggcctggcatccaaccaaccagaacgcg
gtgatcatggtggatctgacccgtgacccgaccccgctcatcgagctcaccagcgaggag
atccgcgagcgcctctacaccaggaaggatgatctcggggatctggcggccattccggtg
aagctggtgcacatcaacaagtgccccgtgctggcgccggccgccaccctgaccccggag
cgggccgaccagcttggcatagacagggagcagtgccgcaagagcctggatctgctgcgg
gcccatcccgaggtgcgggaaaaactggtggaggtgttcaatcaggagtttgccggcagc
aatgacagcgatcccgatacccagctctacgccggtttcttcggtcacggcgacaagtcc
accatggatctggtgcgcgccaccccggcggatctgctgggggagcgggaatttgccttc
accgactcacgactgccggagatgctgttccgctaccgtgcccgcaactggccccacacc
ttgagcgaagcggagcagaagcgctggcgcctgcactgcagcgactacttcagccgccgt
ctgccggactatgtgccccgtctcgaggcgctggcggagcagaatcagggtaacgaacgg
aactttgcgatcctaaagagtctctatcactatctggaagatctatga
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