Aeromonas rivipollensis: C7N77_16120
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Entry
C7N77_16120 CDS
T05453
Name
(GenBank) diguanylate phosphodiesterase
KO
K18765
RNase E specificity factor CsrD
Organism
arv
Aeromonas rivipollensis
Brite
KEGG Orthology (KO) [BR:
arv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arv03019
]
C7N77_16120
Messenger RNA biogenesis [BR:
arv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C7N77_16120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
Motif
Other DBs
NCBI-ProteinID:
AVP94549
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All DBs
Position
3511800..3513440
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AA seq
546 aa
AA seq
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MLNKHEGNLLLVSALVCIPMLLLQGLWLAPPASPLTLLLVLMTTLIGFALLLFLTHSVRK
GERERQEQRWLLALQQRDPAMLESPQAQTALRQLLASFSEAELDAHRQISELQQQATQDE
MTGLRNRHAFRRDLTELLLQETTQTAILVLIRATELARLNAQRGFQSGDAYIRDISNLIN
LVVNRFPGHQVYRISGSDFAVLLPSDINIPPHLLGQEFKRAFDHYHRERELENVAYTGLT
QLSRAQNIEAILARADLALARAQTETINGWAIQQHDHSSNLHGQQHWKRVLEDLLSQPDC
ITLFSQPVQAFNRDMVPYQDISARFSNREGIQLPTDTLFAMAQRLEMLMRLEQMLITHVM
RQYRAFDQQTHRWGINLSSCLLQNSAFLIWFDHQLQKDANISANLVFALDEEHLKHNMIG
GKRLFELLRRHGSRSTIRNFGKGMDSFTLLHELRPDYVKLDPLLLGTLERDIANQQFVRM
IVDVSHRMGCLVIAEGVEELGQKQLLQGMYVDGLQGYLIARPQELRPDIPHPGVFTGDVS
TSAGSE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgttgaataaacacgagggaaatctgctgctggtcagcgccctggtctgcattcccatg
ctgttgctgcagggactctggcttgcgcctccggcctcccccctcaccctgctgctggtc
ctgatgaccaccctcatcggcttcgccctgctgctctttctcacccacagcgtgcgcaag
ggggagcgggagaggcaggagcagcgctggctgctggcgctgcaacaacgggatcccgcc
atgctggagagcccgcaggcacaaacggcgctacgccagttgcttgcctccttcagtgaa
gccgaactcgatgcacatcgccagataagcgaactgcaacagcaggcgacccaggacgag
atgacgggcctgcgcaaccgccatgcattcaggcgcgatctcaccgagctgctgctgcag
gagacgacccagaccgccatcctggtgctgatccgcgccaccgagctggcccgcctcaat
gcccagcgcggcttccagtccggggatgcctacatcagggatatttccaacctcatcaat
ctggtggtcaaccgctttcccgggcatcaggtctatcgcatctcgggttctgattttgcg
gtgctgctcccctctgacatcaacattccgccccatttgctggggcaggagttcaagcgg
gccttcgatcattatcatcgggaacgggaattggaaaatgtggcctacacagggctgacc
cagctctcccgcgcgcagaatatcgaggctatcctggcccgcgcagatctcgccctggca
cgggctcagactgagaccatcaacggctgggccatccagcaacatgatcactccagcaac
ctccatggccagcagcactggaagagagtgctggaggatctattgtcgcagccggattgc
atcacgctcttcagccagccggtgcaggcgttcaatcgggacatggtgccctaccaggac
atctctgcccgcttcagcaatcgagaaggcatacagctccccacagacacgctctttgcc
atggcacaacgactggaaatgctgatgcggctggagcagatgctgatcacccatgtcatg
cgccagtatcgcgccttcgaccagcagacccaccgctgggggatcaacctctccagctgc
ctgttgcagaacagcgcctttttgatctggtttgatcaccaactgcaaaaggatgcgaac
atcagcgccaatctggtcttcgctctggatgaggagcacctgaaacacaacatgatcggt
ggaaagcggctgtttgaactgctcaggcgccatggcagtcgctccaccattcgcaacttt
ggcaaggggatggactccttcaccctgcttcatgagctgaggccggattatgtgaagctg
gatccgctgctgcttggcaccctggaacgggacatcgccaaccagcagttcgtgcggatg
atagtcgacgtctcccatcgcatgggctgtctggtgatagcggaaggggtggaggagctc
ggtcagaagcagttgttgcaaggcatgtatgtggacggattgcaggggtatctgatcgca
cggccccaggagctgaggcctgacattccccatccgggggtcttcactggggacgtttca
acttcagcagggtcagaatga
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