Aeromonas rivipollensis: C7N77_18910
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Entry
C7N77_18910 CDS
T05453
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
arv
Aeromonas rivipollensis
Brite
KEGG Orthology (KO) [BR:
arv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arv03032
]
C7N77_18910 (topA)
03400 DNA repair and recombination proteins [BR:
arv03400
]
C7N77_18910 (topA)
Enzymes [BR:
arv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C7N77_18910 (topA)
DNA replication proteins [BR:
arv03032
]
Prokaryotic type
DNA Topoisomerases
C7N77_18910 (topA)
DNA repair and recombination proteins [BR:
arv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C7N77_18910 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AVP95046
UniProt:
A0AAP4MZA1
LinkDB
All DBs
Position
complement(4101950..4104571)
Genome browser
AA seq
873 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDYVVKSSVGHVRDLPTSGSASTEPKKPVIRGIKLSES
EKAAKDRNALFSRMGINPTAGWQANYQILPGKEKVVSELQSLAEKADTIYLATDLDREGE
AIAWHLREIIGGDDSRYKRVVFNEITKTAIQEAFAQPSDLNIHRVNAQQARRFLDRVVGY
MVSPLLWKKLARGLSAGRVQSVAVRLIVDKEREIKAFVPVEFWDLNADLLTGDKADLRME
VVSRNGVDFKPVTQAETFAAVAALEGVDYKVVNREDKPTGSKPSAPFITSTLQQAASTRL
SFGVKKTMMMAQRLYEAGYITYMRTDSTNLSKEAVEAVREYIGEQYGAAYLPAEPTLYGS
KAGAQEAHEAIRPSNVLVTAEMLEGMEPDAMRLYDLIWRQFVACQMTPAQYDSSTLTVKA
GEFELKARGRTLRFAGWTKALPPMGRKGEDSQLPAVTVGEILKLVKLDPRQHFTKPPARF
TEAALVRELEKRGIGRPSTYASIISTIVDRGYVRVESRRFFAEKMGEIVTDRLVENFVEL
MNYEFTAKMEDKLDGIAEGSLEWKKVLDAFYAEFTQELEQADKPAEEGGMRANQMVLTDI
DCPDCGRKMGIRTATTGVFLGCSGYALPPKERCKKTINLVSADEFVSATDGDEAETEALR
AKHRCGVCGTAMDAYIIDDSRKLHVCGRNPDCDGYEIEQGQFKLKGYEGPSIECDRCGSE
MQLKNGRFGKYMGCTNETCKNTRKILKNGDIAPPKEDPVPLPELKCTQSDAHFVLRDGAA
GLFLAASNFPKSRETRAPLVEELKRFRDRLSPKHQYLADAPASDPDGNASVVRFSRKSKE
QYVMTEVNGKATGWTAHYDNGKWQESLAKAKKS
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcactggtcatagtggagtctccggccaaggccaagaccatcaacaaatat
ttgggcaaggactacgtggtgaaatccagcgtcggtcacgtgcgcgatctgccgaccagc
ggcagcgccagcacagagcccaaaaaacctgtcattcgcggcatcaagctcagcgaatcc
gagaaggcggccaaggatcgcaacgccctgttctccaggatggggatcaacccgaccgca
ggctggcaggccaactaccagattttgcccggcaaggagaaagtggtcagcgagttgcag
agtctggccgagaaggccgacaccatctatctcgcaaccgacttggacagagaaggagag
gccatcgcctggcacctgcgcgagatcatcggcggtgatgacagccgctacaagcgggtg
gtgttcaacgagatcaccaagaccgccatccaggaggcctttgcccagccgtccgatctg
aacatccatcgcgtcaacgcccagcaggctcgtcgcttcctcgaccgcgtggtgggttac
atggtctccccgctcttgtggaagaagctggctcgcggtctctccgccggccgggtgcag
tccgtcgcggtgcgcctcattgtcgataaagagcgcgagatcaaggccttcgtgccggtg
gagttctgggatctcaacgccgatctgctgaccggtgacaaggcggatctgcggatggaa
gtggtcagccgcaacggcgtcgacttcaagccggtgacccaggccgagaccttcgccgcc
gtggccgccctggaaggggtcgactacaaggtggtgaaccgggaagacaagccgaccggc
tccaagccgtccgcccccttcatcacctccaccctgcagcaggcggcttccacccgactg
agcttcggggtcaagaagaccatgatgatggcccagcgtctctacgaagcgggttacatc
acctacatgcgtaccgactccaccaacctcagcaaagaggcggtcgaggcggtgcgggaa
tatatcggcgagcagtatggcgccgcctacctgccggccgagccgactctctatggttcc
aaggctggcgcccaggaggcccacgaggcgatccgtccctccaacgtgctggtgactgcc
gagatgctggaagggatggagccggacgccatgcggctctatgacctcatctggcgccag
tttgtggcgtgccagatgaccccggcccagtacgactcctccaccctgaccgtcaaggcg
ggcgagttcgagctcaaggcccgcggtcgcaccctgcgcttcgccggttggaccaaggcc
ttgccgcccatgggccgcaagggggaagacagccagctgccggcggtgaccgtcggcgag
atcctgaagctggtcaagctggatccccgtcagcacttcaccaagccgcccgcccgcttc
accgaagcggccctggtgcgcgagctggaaaaacgcggcataggccgcccgtccacctac
gcctccatcatctccaccatcgtcgatcgcggctatgtgcgggtcgagagtcgccgtttc
ttcgccgagaagatgggtgagatcgtcaccgaccgtctggtggagaacttcgtcgagctg
atgaactacgagttcaccgccaagatggaagacaagctcgatggcatcgccgaaggcagc
ctggagtggaagaaggtgcttgacgccttctacgccgagtttacccaggagctggagcag
gccgacaagccggcggaagaggggggcatgcgtgccaaccagatggtgctgaccgacatc
gactgcccggactgcggccgcaagatgggtattcgtaccgccactaccggcgttttcctc
ggttgctccggttacgccctgccgccgaaagagcgctgcaagaagaccatcaacctggtc
tccgccgacgagttcgtctccgccaccgacggtgacgaggccgagaccgaggcgctgcgc
gccaagcaccgctgcggcgtctgcggcaccgccatggatgcctacatcatcgacgacagc
cgcaagctgcacgtctgtggtcgcaacccggactgcgacggttacgaaatcgagcagggt
cagttcaagctcaagggctatgaagggccgagcatcgaatgcgatcgctgcggctccgag
atgcagctcaagaacggccgcttcggcaagtacatgggttgcaccaacgagacctgcaag
aacacccgcaagatcctgaaaaatggtgacatagcgccaccgaaggaagatccggtgccg
ctgcccgagctcaagtgcacccagtccgacgctcacttcgtgctgcgtgacggggcggcc
ggtctcttcctcgccgccagcaacttcccgaaatcccgtgagactcgtgcgccactggtc
gaagagctcaagcgcttccgcgaccggctgtcgcccaagcatcagtacctggccgacgcc
ccggcgtcagatcctgacggtaacgcatccgtggtgcgcttcagccgcaagagcaaggag
cagtacgtgatgacggaggtgaacggcaaggcaacaggctggaccgcccattacgacaat
gggaagtggcaggagagcctggctaaggcgaagaagtcctga
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