Aeromonas rivipollensis: C7N77_19620
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Entry
C7N77_19620 CDS
T05453
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
arv
Aeromonas rivipollensis
Pathway
arv03030
DNA replication
arv03430
Mismatch repair
arv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C7N77_19620 (holA)
03430 Mismatch repair
C7N77_19620 (holA)
03440 Homologous recombination
C7N77_19620 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arv03032
]
C7N77_19620 (holA)
03400 DNA repair and recombination proteins [BR:
arv03400
]
C7N77_19620 (holA)
Enzymes [BR:
arv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C7N77_19620 (holA)
DNA replication proteins [BR:
arv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C7N77_19620 (holA)
DNA repair and recombination proteins [BR:
arv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C7N77_19620 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AVP95658
LinkDB
All DBs
Position
4249173..4250207
Genome browser
AA seq
344 aa
AA seq
DB search
MRIYPEQFADHLKAGLKPCYLVFGDEPLLKLEAIDAVRQVARKQGFDERHSFVVEAGLDW
NQVYDACQAMSLFSARQIIELELPAKVDKDLAARITEIGKQLHPNLLLVLSGGRLNQTQM
KAAWFDKLSQSGTYVPVNHPEPRFFPRWMSARFQRFGLKALPDAVNFMCHAFEGNLLAAS
QEIEKLTLLGPPQPISVAYLQETIIRHAHFTPFQLVDTLLEGKVNRAQRILLALRAEGTE
PGMLAWTLCRELEQLTELALAARAGQPLVEHFSRLRIWQSRQQLIQQALTRLPVGKIQQL
WQLMARLDDAQRRFDTEQAWLMLQTIALGFRDGTPLPLLEADPC
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcggatctatcccgagcagtttgcggaccatctcaaggcagggctcaagccctgctat
ctcgtttttggtgacgagccgctgctcaagctcgaggccatagacgccgtgcgtcaggtg
gcccgcaaacaggggttcgatgagcgccacagcttcgtggtggaagccgggctggactgg
aatcaggtctatgacgcctgtcaggccatgagcctcttctcggcccgccagatcatcgag
ctggagctgcccgccaaggtcgacaaggatctcgccgcccgcatcaccgagatcggcaag
caacttcatcccaacttgctgctggtgctctcgggggggcgtctcaaccagacccagatg
aaggcagcctggttcgacaagctgagccagagcggcacctatgtgccggtcaatcacccc
gaaccccgcttcttcccgcgctggatgagtgcgaggtttcaacgcttcggcctcaaggcg
ctgccggatgcggtcaacttcatgtgtcacgccttcgagggcaacctgctggccgcgagt
caggagatagagaagctgaccctgctcggcccgccccagcctatcagcgtcgcctatctg
caagagaccatcatacgccacgcccacttcacccccttccagctcgtcgataccctgctg
gagggcaaggtgaaccgagcccagcgcatcctgctggcgctgcgggccgaggggaccgag
cccggcatgctggcctggaccctgtgccgggagctggagcagctcaccgagctggccctg
gccgcccgtgccggtcagcctctggtggaacacttcagccggttgcgcatctggcagagc
cgccagcagctcattcagcaagccctgacccggctgcccgttggcaagatacagcagctg
tggcagctgatggcccggctggatgacgcccagcgccggttcgacaccgagcaggcctgg
ctgatgttacagaccatagccctgggctttcgcgatggcacgccgctgcccctgctggag
gcggatccatgctga
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