Aeromonas rivipollensis: C7N77_19775
Help
Entry
C7N77_19775 CDS
T05453
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
arv
Aeromonas rivipollensis
Pathway
arv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7N77_19775 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arv03019
]
C7N77_19775 (pnp)
03016 Transfer RNA biogenesis [BR:
arv03016
]
C7N77_19775 (pnp)
Enzymes [BR:
arv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C7N77_19775 (pnp)
Messenger RNA biogenesis [BR:
arv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C7N77_19775 (pnp)
Transfer RNA biogenesis [BR:
arv03016
]
Prokaryotic type
tRNA degradation factors
C7N77_19775 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_RRP5
CsrA
OB_RRP5_4th
KH_SLS1_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AVP95189
UniProt:
A0AAW9Y5L5
LinkDB
All DBs
Position
complement(4277226..4279367)
Genome browser
AA seq
713 aa
AA seq
DB search
MNPIVKSFQYGQHTVTLETGVMARQATAAVMVSMDDTCVFVTVVGKKEADHGRDFFPLTV
NYQERTYAAGRIPGGFFRREGRPSEGETLISRLIDRPIRPLFPEGFLNEVQVVATVMSVN
PAVSPDIVAMIGASAALAISGIPFGGPIAAARVGYMNGQYVLNPTTTELPQSDLDLVVAG
TANAVLMVESEAAILSEEVMLGAVVYGHEQMQVVINAINEFAADVGTQPWDWTPPAVNEA
LKAKVAELATAELGEAYRITEKAVRYAAIGAIKSRVVEQVIASGVEEDAKKIGEEFHSLE
SRIVRGRVVRGEPRIDGRDPEMIRALSVGTGILPRAHGSALFTRGETQAIVVATLGTERD
AQNIDELAGHRADRFMLHYNFPPYCVGETGMMGSPKRREIGHGRLAKRGVAAVMPSAAEF
PYVVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEEEGFVVLSDI
LGDEDHLGDMDFKVAGTTQGITALQMDIKIEGITKEIMEIALKQARGARLHILKVMDEAI
QAPRAEISDFAPRIHTIKINPEKIKDVIGKGGSVIRALTEETGTNIELDDDGTVRISAVA
NEAAMEAIRRIEAITAEIEVNRIYEGKVVRLADFGAFVNILPGKDGLVHISQITDARVQN
VADFLKIGDVVKVKVLEVDRQGRVRLSIKEANAPTEAAAPVADVAVAEEPAAE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctattgtaaagtcattccagtacggtcaacacaccgtcaccctggaaaccggt
gtgatggcccgtcaagccactgcggccgttatggtcagcatggacgatacctgcgtattt
gtgaccgtcgtcggcaagaaagaggccgatcacggccgtgatttcttcccgctgaccgtc
aactaccaggagcgtacctatgctgctggtcgtatcccgggtggtttcttccgtcgtgaa
ggccgtccgagcgaaggcgagaccctcatctcccgcctgatcgaccgtcctattcgtccg
ctgttcccggaaggcttcctcaatgaggttcaggtggttgccaccgtcatgtccgtgaac
ccggccgtgtcccccgacatcgttgccatgatcggtgcctctgctgccctggccatctca
ggtatcccgttcggcggcccgattgccgcggcccgcgtgggttacatgaacggccagtac
gtgctgaacccgaccaccaccgaactgccccagagcgatctggacctggtggttgccggt
accgccaacgccgtgctgatggtggaatccgaagcggccatcctctccgaagaggtgatg
ctgggcgccgtggtctatggccacgagcagatgcaggtggtgatcaacgccatcaacgaa
ttcgccgccgacgtaggtacccagccgtgggattggaccccgcctgccgtcaacgaagcg
ctgaaagccaaggttgccgagctggccaccgccgaactgggtgaagcctaccgcatcacc
gagaaggccgtgcgttacgccgccatcggtgccatcaagtcccgtgtggttgagcaagtc
atcgcctccggcgtggaagaagatgccaagaagatcggcgaagagttccacagcctggaa
agccgcatcgtccgtggccgtgtggtccgtggcgagccgcgcatcgatggccgcgatccg
gaaatgatccgtgccctgtccgttggcaccggcatcctgccgcgcgctcacggctccgcc
ctgtttacccgtggtgagactcaggcgatcgtggttgcgactctgggtaccgagcgtgac
gcccagaacatcgacgagctggctggccaccgtgccgaccgcttcatgctgcactacaac
ttcccgccgtactgcgtcggcgagaccggcatgatgggtagccctaagcgtcgtgaaatc
ggtcacggtcgtctggccaagcgcggcgttgctgccgtgatgccgagcgccgccgagttc
ccgtacgtggtacgcgtggtgtctgaaatcaccgaatccaacggttcctcctccatggcc
tccgtttgtggttcttccctggcgctgatggacgcgggtgtgccgatcaaggcctccgtt
gccggtatcgccatgggtctggtgaaggaagaagaaggtttcgtcgtgctgtccgacatc
ctgggtgatgaagatcacctgggcgacatggacttcaaggtggccggtactacccagggt
atcaccgcgctgcagatggacatcaagatcgaaggcatcaccaaagagatcatggagatt
gccctcaagcaagcccgtggtgctcgcctgcacatcctgaaggtcatggacgaagccatc
caggcgccccgtgccgagatctccgatttcgccccgcgcatccacaccatcaagatcaat
cctgagaagatcaaggatgtcatcggcaagggcggttccgtgatccgtgccctgaccgaa
gagaccggcaccaacatcgagctggatgatgacggtacagtccgcatctccgccgttgcc
aacgaagccgccatggaagccatccgtcgcatcgaggccatcaccgccgagatcgaagtg
aaccgcatctatgaaggcaaggttgtgcgtctggccgatttcggcgccttcgtcaatatc
ctgccgggtaaagacggtctggtacacatctcccagatcaccgatgcccgcgtgcagaac
gtggccgacttcctgaagatcggtgacgttgtgaaggtgaaggtactggaagtggaccgt
caaggccgtgtgcgtctctccatcaaggaagcgaatgcaccgaccgaagccgccgccccg
gttgccgacgtggccgttgccgaagagccggctgccgaataa
DBGET
integrated database retrieval system
