Arthrobacter alpinus A3: MB46_00955
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Entry
MB46_00955 CDS
T04228
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
arw
Arthrobacter alpinus A3
Pathway
arw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MB46_00955
09124 Replication and repair
03420 Nucleotide excision repair
MB46_00955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arw03021
]
MB46_00955
03400 DNA repair and recombination proteins [BR:
arw03400
]
MB46_00955
Enzymes [BR:
arw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MB46_00955
Transcription machinery [BR:
arw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MB46_00955
DNA repair and recombination proteins [BR:
arw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MB46_00955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
bMG3
Motif
Other DBs
NCBI-ProteinID:
ALV44293
LinkDB
All DBs
Position
complement(229689..231326)
Genome browser
AA seq
545 aa
AA seq
DB search
MADGPLIVQGDKTILLEVAHPDSTEARHAIATFAELERAPEHMHSYRITPLGLWNARAAG
LDAEHVVDTLLTFSRYAVPHALLLDIVEIMARYGRLRLEKDPHHGLVLRSDDELILTEVL
HVRKIGALLGSRIDALTAVVHGSARGELKQLLLKASWPAEDLAGYVDGTAHPIALNDDES
TWTLRDYQRTAVENFWAGGSGVVVLPCGAGKTIVGAAAMAASGTTTLILVTNTLSARQWK
AELLKRTTLTESEIGEYSGAVKEIHPVTIATYQVLTTRRNGAYPHLELLDANDWGLLIYD
EVHLLPAPIFRMTADLQARRRLGLTATLVREDGREGEVFALIGPKRYDAPWKDIEAQGYI
APADCVEVRVSLSRAERLAYATADDAGRYRLCATSPAKSVVAQALVEAHPDEQILVIGQY
IDQLDELAARLNAPLIKGTTPVKERERLFEEFRRGNISVLVVSKVANFSIDLPEASVAIQ
VSGAFGSRQEEAQRLGRLMRPKADGRTARFYTLVARDTVDSDFAAKRQRFLAEQGYAYRI
TDATA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggtcccttaatcgtgcagggcgacaagaccatactgctggaagtggcgcat
ccggactcgaccgaggcgcgccatgccatcgccacctttgccgagctggaacgggctccg
gaacacatgcacagctaccggatcacgccgctgggattgtggaatgcccgggccgccggg
ctcgacgccgagcacgtggttgacaccctgctgacgttttcccgctacgccgtgccgcac
gcgctgctgctggacattgttgaaatcatggcccgctacggccgcctgcggctggaaaaa
gacccgcaccatggactggtgttgcgcagcgacgacgagttgattctgaccgaggtgctg
cacgtaaggaagatcggcgcactgctgggatcccggatcgatgcactgacggccgttgtg
cacggctcggcacgcggtgagctcaaacagttgttgctcaaggccagctggcccgcagag
gatcttgccggttacgttgacggcacggcacaccctattgccctcaacgacgatgaaagc
acgtggacgctgcgcgattaccaacgcacagccgtggagaacttctgggcgggcgggtcc
ggcgtggtggttttgccctgtggggcaggaaaaaccattgtaggcgcagcagccatggcc
gcctctggcaccaccaccctaatcctggtcaccaacacactttcggcacggcagtggaaa
gccgagctgctcaaacggaccaccctgacggagtccgagattggggaatattcgggggct
gtcaaggagatccacccggtcacgatcgccacgtaccaggtactcaccacgcgccgcaat
ggcgcctacccgcaccttgagctgctcgatgccaacgattgggggctgctgatctatgac
gaggtccatctgctgcccgcaccgattttcaggatgacggcggatctgcaggctcggcgc
cgcctgggcctgacggccaccttggtgcgcgaagacggccgcgagggcgaggtgttcgca
ctcatcggacccaaacggtatgacgcgccgtggaaggacatcgaggcacagggctacatt
gcccctgccgactgcgttgaagttcgggtatccctttcccgtgcggagcgacttgcctat
gccaccgcggacgacgccgggcggtaccgtttgtgcgccacctcccctgcgaagtcggtg
gttgcgcaggcactggtggaggcccatcccgacgagcaaattttggtcattggacaatac
atcgaccagctcgatgaattggctgcgcggctcaatgccccactgatcaagggcaccacc
cctgtcaaggagcgggagcggctctttgaggaattccggcgtggcaacatttcggtgttg
gtggtgtcaaaggtggccaacttctccatcgacctccccgaggcctccgttgccattcag
gtgtcgggagcttttggctcacgtcaggaggaggctcagcggctggggcggctcatgcgc
cccaaggccgacggccgcacagcacgtttctatacgcttgttgcccgtgacacggtggat
tccgattttgcggccaagcgccagcgctttctggccgaacagggttacgcctacagaatc
actgacgccaccgcctag
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