Arthrobacter alpinus A3: MB46_01070
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Entry
MB46_01070 CDS
T04228
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
arw
Arthrobacter alpinus A3
Pathway
arw03420
Nucleotide excision repair
arw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MB46_01070
03430 Mismatch repair
MB46_01070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arw03400
]
MB46_01070
Enzymes [BR:
arw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MB46_01070
DNA repair and recombination proteins [BR:
arw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MB46_01070
MMR (mismatch excision repair)
Other MMR factors
MB46_01070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
B1
Motif
Other DBs
NCBI-ProteinID:
ALV44312
LinkDB
All DBs
Position
253902..256463
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AA seq
853 aa
AA seq
DB search
MLFDPYPEKSKPKLSAGAGLPVWQPFEQDDPGADMPEFGADGAVPAPPAVGDAAENRAPD
ADYGSEGAGSSSRWPDPAGLLEGMNPQQEEAVVHTGGPLLIVAGAGSGKTRVLSHRIAYL
LATGQAHPGQILAITFTNKAAAEMRERIEALIGDAAKSMWISTFHSSCVRILRREAKIIG
LNSNFSIYDSADSLRLITLVAKGLDLDPKKFAPKAIMHKISSLKNELIDDDENSMNTNFN
EPFEAAVAEVYKGYAQRLRQANAMDFDDLIAQTVYMFRAFPGVAEYYRRRFRHVLVDEYQ
DTNHAQYALVKEIVGTDAGDSVAPAQLTVVGDSDQSIYAFRGADIRNIVEFEQDYPNADT
IKLEQNYRSTQNILSAANAVISRNPNRREKRLWTAEGDGEKIVGYVAESEHEEARFIAKE
IDRLQDETDIRPGDVAIFYRTNAQSRAIEDILVRVGLPYRVVGGTRFYERKEIKDALAYL
RALVNPDDDVNLRRILNEPKRGIGDRAEGAVAALAERERISFSAALARADEAPGIASRSL
NAVNTFAKMMSDLGEVAATASPATALEAVLEQTGYLEALRKSTDPQDESRVENLAELLAV
VREFGQENPEGTLGEFLEQVSLVADADQIPDAPGGSEAEAAAAVAEAKRLGVVTLMTLHT
AKGLEFPVVFLTGMEHGLFPHSRSATDPKELAEERRLAYVGLTRARQRLYLTRSEVRSLW
GQSQYNPASQFIEEVPAELIEWKREGTARVAPVSGDFGSSRYSGSSWGAGSAVGGRDSGV
LPPSISARAVAGRVQPQKEVVSVSVGDKVNHTSFGNGTVLEVSGAGDKSVAKVRFEIGEK
RLLLRYAPLVKEE
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttgacccttaccccgaaaagtccaaaccaaagctcagcgcaggtgccggtctg
cccgtctggcagccctttgaacaggacgacccgggcgccgacatgcccgaattcggcgca
gacggggccgttccggcacccccagccgtcggcgacgccgcagaaaaccgcgccccggat
gctgactatggcagcgaaggcgctggctcgtcctcgcgttggccggaccccgccggactg
cttgagggaatgaacccccagcaggaagaggccgtggttcacacgggaggcccgctgctg
attgttgccggtgctggctcgggcaagacccgcgtcctgagccatcggattgcgtatctc
ttggcaacgggacaggcacatccgggccagatcctggcgatcaccttcaccaacaaggcc
gccgccgaaatgcgtgaacgtattgaggccttgatcggcgacgccgcgaagagcatgtgg
atttccaccttccactcctcatgtgtgcggatcttgcggcgcgaagccaagatcattggg
ctcaactcaaacttctccatctacgactcagcggattcgttgcgcctgatcaccttggtg
gccaagggcctggacctggacccgaagaagtttgcgcccaaggccattatgcacaagatt
tcatcgttgaagaatgagctcatcgacgacgatgaaaactccatgaacaccaacttcaat
gagccattcgaggcggccgtggccgaggtttacaagggctacgcgcagcgccttcgccaa
gcaaatgccatggattttgacgatctcattgcccagaccgtctacatgttccgggccttc
ccgggcgttgccgaatactaccggcgccggttccggcacgttttggtggacgagtaccag
gacaccaaccacgcccagtacgcgctggtcaaggagattgttggcactgacgctggcgat
tccgtggcacctgcgcagcttacggttgtgggcgattctgatcagtccatctatgcgttc
cgtggcgcggatattcgcaacattgtggagttcgagcaggactatcccaatgctgacacc
atcaagctggagcaaaactaccgttccacgcagaacattctcagtgccgccaacgccgtg
atttcacgcaatcccaaccgccgcgaaaagcggttgtggacagccgagggcgacggcgaa
aagatcgtcggctatgtggccgagtcggagcacgaggaagcccgtttcatcgccaaggag
attgaccgtctccaggatgagacggacatacgtcccggcgatgtggccattttctaccgc
accaacgcccagtcccgcgctatcgaggacattttggtgcgtgtgggcctgccgtaccgt
gtggttggcggcaccaggttctacgagcgcaaggaaatcaaggatgcgctggcctacctg
cgcgccttggtcaacccggacgacgacgtgaacctgcgcaggattctcaacgaaccaaag
cgtggcatcggcgaccgtgcagaaggtgccgtggcggccctggcggagcgggaacggatc
tcgttctcggctgccttggcgcgagcagacgaggcgccagggatcgcttcacgatccctc
aacgccgtcaacacttttgccaagatgatgtccgatcttggtgaggtggccgcaacagcc
agccccgcaacggcgcttgaagccgtgctggagcagaccggctacctggaagcgttgcgt
aagagcactgatccacaggatgagtcgcgcgtggaaaacctggcggaacttctcgccgtc
gtgcgtgaatttgggcaggagaaccccgaaggcacgctgggggaattcctcgagcaggtc
tcgctggtggccgacgccgaccagatccccgacgcccccggcggctccgaagcggaggcc
gcggcggctgtggcggaggcgaagcgactgggcgtggtgacgctcatgacgctgcacacg
gccaagggtcttgaattccccgtggttttcctgacaggcatggaacacggtttgttcccg
cattcgcgctcagccacggatcccaaggaactggctgaggaacggcgtttggcgtatgtg
gggctgacacgcgcacgccagcgcctgtacctgacgcgttcggaagtacgcagcttgtgg
ggccaaagccagtacaaccctgccagccagttcatcgaggaagtcccggccgaactcatt
gagtggaagcgcgaaggcacggcacgtgtggctcctgtgagcggtgactttggcagcagc
cgttattcggggtcgtcgtggggtgcagggtctgccgtgggtggtcgcgactccggcgtt
cttccgccgagcatttctgcccgagccgtggcgggacgcgtccagccgcaaaaagaagtt
gtttctgtcagcgtgggagacaaagtcaaccacacgagctttggcaacggtaccgtgctg
gaagtcagcggcgcgggcgataaatcggtagccaaggtccgcttcgagatcggtgaaaag
cggctcctgctgcggtacgcgccgctggtgaaagaagagtag
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