Arthrobacter alpinus A3: MB46_04940
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Entry
MB46_04940 CDS
T04228
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
arw
Arthrobacter alpinus A3
Pathway
arw03030
DNA replication
arw03410
Base excision repair
arw03420
Nucleotide excision repair
arw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MB46_04940
03410 Base excision repair
MB46_04940
03420 Nucleotide excision repair
MB46_04940
03440 Homologous recombination
MB46_04940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arw03032
]
MB46_04940
03400 DNA repair and recombination proteins [BR:
arw03400
]
MB46_04940
Enzymes [BR:
arw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MB46_04940
DNA replication proteins [BR:
arw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MB46_04940
DNA repair and recombination proteins [BR:
arw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MB46_04940
NER (nucleotide excision repair)
GGR (global genome repair) factors
MB46_04940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ALV47420
LinkDB
All DBs
Position
1154010..1156637
Genome browser
AA seq
875 aa
AA seq
DB search
MAFRAFYAMPVDKFVTQAGQYTNAVHGFTAMLLTMIRQQKPTHVVVAFDLDTPTFRSLEY
TEYKGGRNKTPEEFYGQIDLIIKVMEAMKIPTISVDGFEADDIIATLSTQGEAAGWDVVV
VSGDRDAFQLITDKVSVLYPKKGISDIPPMDAAAVEAKYFVPPSRYSDLAALVGETADNL
PGVPGVGPKTAAKWINQYGGLEGIFENLDAIGGKVGESLRAHVEDVKRNRRLNHLLRDME
LPVPLEDTLLQAPDRDAVEELFDSLEFNQLRKRLFDLFGEEETADAGEVHQVPAHQVVTE
AAALEAWLAAAKGNVAVDVLAAKVGMGHEATAVALVGKESAVVVDLGTADAALDSAVAAW
LVSDAPKVVHEYKEALKALSVRGLSLNGVVDDTSLSGYLIQPDRRSYELDELSQVHLKVG
FDAGTASDAGQLDLGLEADAKFGEAVQRAYVALLLSEHFEPLLEERGAAVLLRDLELPLA
AVLARMELTGIDVSQERLTTLLADFTAAMNAAQQAAYAAIGHEVNLGSPKQLQEVLFEEL
GLPKTKKIKTGYTTDAASLKSLLEKTGHEFLAQLMAHREASKLKQMVETLKKSVDSDGRI
HTTYAQNVAATGRLSSNNPNLQNIPIRSEEGRRVRDIFVVSEGYECLLAADYSQIEMRIM
AHLSGDAGLIQAYAEGEDLHRYVGSHVFGVAPEDVTSAMRSKVKAMSYGLAYGLTSFGLS
KQLEISVDEARTLVKDYFDRFGGVRDYLRGVVEQARKDGYTSTIEGRRRYLPDLSSSDRQ
LRELAERIALNSPIQGSAADIIKHAMLGVAAELTAKDLKSRMLLQVHDELILEIWPGELE
AVKTLVVEQMGAAADLLVPLEVQVGLGASWNDAGH
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggctttccgcgctttttacgccatgcccgtggacaagtttgtgactcaggccggccaa
tacaccaatgccgtccatggttttaccgccatgttgctgaccatgattcgtcagcaaaag
cccacacacgtggttgtggcctttgacctggacacccccacgttccgctccttggagtac
acggaatacaagggcgggcgcaacaagacgcccgaggagttctacggccagatcgatttg
atcatcaaggtcatggaagcgatgaagattcccaccatttccgtggacggctttgaagcc
gatgacatcatagccacgctctccactcagggagaggccgccggctgggatgtggtggtg
gtttccggtgaccgtgacgccttccagctcatcacggacaaggtttcggtgctttacccc
aagaagggcatctccgacattccgcccatggacgcggcggccgttgaggcgaagtacttt
gtgccgcccagccggtactccgatttggcggcattggtcggtgaaaccgccgataacttg
cctggtgttccgggtgtggggcccaagacggccgccaagtggatcaaccagtatgggggt
cttgaagggatctttgaaaacctggacgccattggcggcaaggttggcgagtccctgcgc
gcgcatgttgaggacgtcaagcgcaaccgccgcctgaaccatctgctgcgcgacatggaa
ctcccggtacccctggaggacaccttgctgcaggctcccgatcgcgacgccgtcgaggaa
ctcttcgactccctcgagttcaaccagctgcgcaagcgcctgtttgacttgtttggcgaa
gaggaaacggccgacgccggtgaagtgcaccaggtgcccgcccaccaggtggtcaccgag
gctgcggcgttggaagcctggttggcggcggcaaaaggcaatgtggccgttgacgtgctg
gccgcgaaggttggcatggggcatgaggccaccgcggtggcgctggtaggcaaggagtcc
gccgtcgtcgttgacctgggtacggcggatgctgcgctggattcagccgtggctgcctgg
ctagtctctgatgcccccaaggtggtgcacgagtacaaagaggcgctcaaggcgctgtcc
gtccgcgggctgtcgctcaatggtgtggttgatgacacctctctgtcgggttatctgatt
cagccggatcgccgcagctacgaattggacgagctgagccaggtacacctcaaggtcggt
tttgatgctggaaccgcctccgatgccggccagctggaccttggccttgaagccgatgcg
aagtttggcgaggctgtgcagcgtgcttatgtggcgctgctgctcagcgagcacttcgag
ccgctcctcgaggaacgtggcgccgcggtgttgctgcgtgatctggaactgccgctggct
gcggtgcttgcccgcatggagttgacgggaattgacgtctcacaggagcggttgaccacc
ctgctggctgattttacggctgccatgaacgccgcacagcaagccgcttacgccgccatt
ggccatgaggtcaacctcggatcacccaagcagctgcaggaagtcttgttcgaggaattg
gggttgcccaaaaccaagaagatcaagaccggatacaccacggacgccgcctcgttgaag
tcgttgctggagaagaccgggcatgaattcctggcccagctcatggcgcaccgcgaagcg
tccaagctgaagcagatggtggagacgctcaagaagtcggttgactccgacgggcgaatc
cacaccacctacgcccagaacgtggccgctaccgggcggctgtcctcgaacaacccgaac
ctgcagaacatcccgatccgcagcgaagagggccgccgggtgcgtgacatcttcgttgtg
agtgagggatatgaatgcctgttggctgcggattactcacagatcgaaatgcgcatcatg
gcacacctctcaggagatgccggcctaattcaggcatatgcggaaggcgaggatctacac
cgctacgttggctcccacgtcttcggtgtggcaccggaagacgtcacctccgccatgcgc
tctaaggttaaggccatgtcctacggcctggcctacgggttgacaagctttggcttgtcc
aagcaattggaaatctcggtggatgaggcccgcaccctggtcaaggactattttgaccgc
tttggcggggtgcgcgactacctgcgcggcgtcgtcgaacaggcccgcaaggacggctac
acctccaccattgagggtcgacgccgttacctgccagacctctccagctccgatcggcag
ctgcgtgaactagccgagcgcatcgccttgaattcacccatccagggctccgcggcagac
attatcaagcacgcgatgctcggtgttgcggcggaactgacggcaaaagacctcaagtca
cggatgctgttgcaggttcatgatgaattgatcctggaaatctggcctggcgagcttgag
gccgtcaagactctcgtagttgaacaaatgggagccgcagcggatctgctggttcctctg
gaagttcaagttggcctcggcgccagctggaacgacgctggccactga
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