Arthrobacter alpinus A3: MB46_10930
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Entry
MB46_10930 CDS
T04228
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
arw
Arthrobacter alpinus A3
Pathway
arw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MB46_10930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arw03021
]
MB46_10930
03019 Messenger RNA biogenesis [BR:
arw03019
]
MB46_10930
Transcription machinery [BR:
arw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MB46_10930
Messenger RNA biogenesis [BR:
arw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MB46_10930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
AAA
Motif
Other DBs
NCBI-ProteinID:
ALV45922
LinkDB
All DBs
Position
complement(2456068..2458335)
Genome browser
AA seq
755 aa
AA seq
DB search
MTDTVTSAAPQAADLDNTAKSAPAKSAGLAGLKLAQLQILAGQLGITGGSRMRKGDLVDA
ISAHQRGSSVADRPARTAKTTGAKASEAAAVDTKTADTKTTARRGTAAKKDAEPVVEAAS
TEGATTESSSANERPARGRGRSRRAASSDGIITTGSAPVAQESQAAAPAAVEPAAADASS
QQPGENDGENRRSRTRNNRRAQGGGRQQESAPEAAVSTEAAPVEATEAAQTAQATEGENT
AEGENAERGNRNQRNNRNQRNAGERSTNDRNDRGQGNANANASTGGSNASNNNANNNDDE
DGSRNNRNRRNRRDRNVNETSDRNDRNDRSGNNNSRNDRNDRFRDRNERRRGRTQGPDFD
DTEVTEDDVLLPVAGILDILENYAFVRTSGYLPGSNDVYVSLSQVKKYNLRKGDAVVGAI
RAPREGEDRSNAQSARQKFNALVRVTSVNGKNPDELKDRVEFAKLVPLYPSERLRLETDP
KKVGPRVIDLVAPIGKGQRGLIVSPPKAGKTLILQAIANAITINNPEVHLMMVLVDERPE
EVTDMQRTVKGEVIASTFDRPADDHTQVAELSIERAKRLVEMGMDVVVLLDSMTRLGRAY
NNSAPSSGRILSGGVDSAALYPPKRFFGAARNIENGGSLTILATALVETGSKADEVIFEE
FKGTGNMELRLSRQLADKRIFPAVDVNASGTRREENLLSPEEVKIMWRLRRVLSGLEMQQ
SLELLTSKIRETGSNVEFLMQIQKTTLGSKAEQDK
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacaccgtaacttcagctgctccccaggccgctgatttggacaacactgctaag
agcgcacctgcaaagtccgcaggactggctggcctgaaattggctcagctgcagattctg
gcaggccagctgggcatcaccggcggctcgcgcatgcgcaagggggatcttgttgacgca
atttcagcccaccagcgtggctcctcggtagctgaccgcccggctcgcaccgccaagacc
accggtgccaaggcatccgaggccgccgccgttgacaccaagacggccgataccaagacc
acagctaggcgtggcaccgctgccaagaaggatgctgagccggtcgttgaagccgccagc
accgagggcgcgaccaccgaatcaagctccgccaatgagcgcccggcccgaggccgtggc
cgtagccgccgtgctgccagcagcgatggcatcatcaccaccggttccgcaccagtagcc
caggaatcacaggcagccgcaccggccgccgtcgagcctgccgcagctgacgcaagtagc
cagcagccaggcgagaacgacggcgaaaaccgccgttcgcggacccgcaacaaccgtcgt
gcccagggtggcggacgccagcaggaatccgctcccgaggctgcagtgtccaccgaggcg
gcgccggttgaggccaccgaagcggcccagaccgctcaggcaactgagggtgagaacacc
gccgagggcgagaacgctgagcgcgggaaccgcaaccagcgcaacaaccgcaaccagcgc
aacgccggcgagcgttcgactaacgaccgcaatgaccgtggtcagggcaacgccaacgcc
aatgcctccaccggcggcagcaatgccagcaacaacaacgccaacaacaacgacgacgaa
gacggctctcgcaacaaccgcaaccgccgcaaccgccgtgaccgcaatgtcaacgaaact
tccgaccgcaatgaccgtaacgatcgcagtggcaacaacaacagccgcaacgatcgcaac
gaccgtttccgcgaccgcaacgagcgccgccgcggacgcacccagggtccggactttgat
gacaccgaggtaaccgaggacgacgtcctgctgcccgtagccggtatcttggacatcctg
gagaactacgcatttgtgcgtacctccggatacctgcccggttcgaacgacgtttacgtc
tccctgtcccaggtcaagaagtacaacctgcgcaagggcgacgccgtggttggtgccatc
cgtgcaccgcgcgaaggcgaagaccgcagcaacgctcagagcgcccgccagaagttcaac
gccctggtgcgcgtcacgagtgtcaatggcaagaaccctgacgagctcaaggaccgtgtt
gagtttgccaagctggttccgctgtacccgtccgagcgcctgcgcctggaaaccgacccc
aagaaggtcggaccccgtgttattgacctggtggccccgatcggtaagggccagcgtggg
ctgatcgtgtccccgcccaaggccggtaagacactgattctgcaggcaatcgccaacgcc
atcacgatcaacaaccctgaggttcacctcatgatggtcctggttgacgaacgccctgaa
gaagtcaccgacatgcagcgcaccgtcaagggtgaggttattgcgtcaaccttcgaccgc
cccgccgatgatcacacacaggttgccgaactctccatcgagcgcgccaagcgactcgtg
gaaatgggcatggacgttgttgttctgttggactccatgacccgtctgggccgtgcctac
aacaactcggctccgtcctcgggccgtatcctctccggtggtgtggactccgcagccctg
tacccgcccaagcgtttcttcggtgcagcccgcaacattgaaaacggcggctcgctgacc
atcctggccacggcactggtggaaaccggttccaaggctgacgaggtcatcttcgaggag
ttcaagggaaccggcaacatggagctccgcctgtcacgccagctggccgacaagcgcatc
ttcccggccgtggatgtcaacgcatcgggtacccgtcgcgaagaaaacctgctttctcct
gaagaagtaaagatcatgtggcgtctgcgccgcgtgctctccggtctggaaatgcagcag
tcacttgaactgctgacctccaagatccgtgaaacaggctccaacgtcgagttcctcatg
cagatccagaagacaaccctgggctccaaggccgaacaagacaagtag
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