Arthrobacter alpinus A3: MB46_13475
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Entry
MB46_13475 CDS
T04228
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
arw
Arthrobacter alpinus A3
Pathway
arw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MB46_13475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arw03021
]
MB46_13475
03400 DNA repair and recombination proteins [BR:
arw03400
]
MB46_13475
Enzymes [BR:
arw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MB46_13475
Transcription machinery [BR:
arw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MB46_13475
DNA repair and recombination proteins [BR:
arw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MB46_13475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Cluap1
Motif
Other DBs
NCBI-ProteinID:
ALV46344
UniProt:
A0A0U3PVB2
LinkDB
All DBs
Position
complement(3018401..3022303)
Genome browser
AA seq
1300 aa
AA seq
DB search
MSSESSFGLMQIGLATAQDIRDWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIVCERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDDAARHEELPNLQIEHDLEKKRMVDTRDSDIATIARDLEGE
LARLEGEGAKAADKKKARDSADRQMANVRKRADADIDRLEQVWDRFKALKVADLEGDEAL
YRELRDRYGMFFEGAMGAEAIKSRLETFDMPGEAEILRDIIANGKGQRKTRALKRLKVVN
AFLTTNNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERFR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSNNILKPSDGRPVTLPSQDMIIGLYHLTTKREGSVGEGR
VFSTSAEAIMAHDAGELHLNSQVKIRLDNFIPGAERKGPEGFVAGGSAIIDTSLGQVIFN
ETLPEDYPWVEAVADKGQLSEIVNDLAERYPKVIVAATLDNLKDAGFYWATRSGVTVAIS
DIKVPESKPAILESYEIKAAKVQAQYDKGLIADEERRQELIDIWNQATNEIADSMRASFA
VSNTINRMVSSGARGNWMQVRQIAGIRGLVANPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALRTANSGYLTRRLVDVSQDVIVREDDCGTERGLTLPIAVVDSMGEFVLHE
EVENSVYARTLAAEVVDSSGTVLAEAGDDVGDVLIAKLFAAGIEEIKVRSVLTCESTVGT
CALCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAVSASRGEDITQGLP
RIQELFEARTPKGVAPIAEAAGRINIDESEKTMRLILTPDDGTEEIAYPVLRRARLTVAD
GEHVEVGQKLIVGAVDPKQVLRILGPRAAQKHLVEEVQGVYRSQGVGIHDKHVEVIVRQM
LRRVTVIESGDSKLLPGELAERGRFETENRRVVSEGKKPASGRNELMGITKASLATESWL
SAASFQETTRVLTQAAMEGKSDPLLGLKENVIIGKLIPAGTGLPRYTNVTVEPTEEAKAN
LFTGPSAFSDFDYVGGVGDLGAEFRAIPLDDYDLGTNFSG
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaatcctccttcggcctcatgcagattggcctggccaccgcgcaagatatt
cgcgactggagccacggcgaagtcaagaagccggaaaccatcaactaccgtacgctcaag
cctgagaaggacggcctcttctgtgagaagatcttcggcccgtcccgcgactgggaatgc
tactgcggtaagtacaagcgcgtgcgcttcaagggcatcgtttgtgagcgttgtggcgtt
gaagtcacccgcgccaaggtgcgccgtgagcgcatgggccacattgaacttgctgctccc
gtaacccacatctggtacttcaagggcgttccctcgcgcttgggctacctcctggacctg
gcaccgaaggaccttgaaaaggtcatctacttcgctgcctacatgatcaccagcgttgac
gacgcagcacgtcacgaagagctgccgaacctccagattgagcacgacctggaaaagaag
cgcatggtggacacccgtgacagcgacatcgccacgatcgctcgcgatcttgagggtgag
cttgcacgcctggaaggcgaaggcgccaaggctgccgataagaagaaggcccgcgattca
gcggaccgtcagatggccaacgtgcgcaagcgcgctgacgctgacatcgaccgcctcgag
caggtttgggaccgtttcaaggccctcaaggttgccgacctcgaaggtgacgaggccctg
taccgcgaactgcgtgaccgttatggcatgttcttcgaaggtgccatgggtgccgaagcc
atcaagagccgtcttgagacctttgacatgcccggtgaggcggagatccttcgcgacatc
atcgccaacggcaagggccagcgcaagacccgtgccctcaagcgtctgaaggttgtcaac
gcattcttgaccaccaacaacagcccgcttggcatggttctggatgccgtcccggtcatc
ccgccggaactgcgccccatggttcagctcgacggtggccgcttcgccacctcggacttg
aacgatctgtaccgtcgcgtgatcaaccgcaacaaccgtctcaagcgcctgcttgatctg
ggtgctccggagatcatcgtcaacaacgaaaagcgcatgctgcaggaagctgttgactcc
ctgttcgacaacggtcgtcgtggccgtcccgtcacgggaccgggcaaccgtccgttgaag
tccctgagcgacatgctcaagggcaagcagggtcgtttccgtcagaacctcctcggtaag
cgcgttgactactctggccgttcggttattgttgttggcccgcagctgaagctgcaccag
tgtggtctgcccaagcagatggctctggagctcttcaagccgttcgtgatgaagcgcctg
gttgacctcaaccacgcacagaacatcaagagcgctaagcgcatggttgagcgtttccgt
ccccaggtttgggatgttctcgaagagatcatcaccgagcacccggtactgctgaaccgt
gcaccaaccctgcaccgtttgggtatccaggcgttcgagcctcagcttgttgaaggtaag
gcaatccagcttcacccgctggtttgtggtgctttcaacgctgacttcgacggtgaccag
atggcagttcacttgccgctgagccctgaagcccaggctgaagcccgcatcttgatgttg
tcctcgaacaacattttgaagccttcagatggccgcccggttaccttgccttcgcaggat
atgatcatcggtctgtaccacttgaccaccaagcgcgagggttccgttggcgaaggccgc
gtattctccacctccgccgaggccatcatggcccacgacgccggtgagctgcacttgaac
tcccaggtgaagatccgtttggacaacttcatcccgggtgccgagcgcaagggtccggaa
ggcttcgttgctggcggctccgccatcatcgacacctccttgggccaggtcatcttcaac
gagactctgcctgaggattacccctgggttgaggctgttgccgataagggtcagctctct
gagatcgtcaacgacctcgccgagcgctaccccaaggttattgtggcagcaacactggat
aacctgaaggatgccggtttctactgggcaacccgctcaggtgtcaccgttgctatctcc
gacatcaaggtgcccgaatccaagcccgccattttggagagctacgagatcaaggcagcc
aaggtccaggcccagtacgacaagggtttgatcgctgacgaggagcgccgccaggagctc
atcgacatctggaaccaggcaaccaacgaaatcgctgactcgatgcgtgcgtccttcgcc
gtgtccaacacgattaaccgtatggtttcctccggtgctcgtggtaactggatgcaggtt
cgccagattgccggtatccgtggcttggtagctaacccgaagggtgaaattattcctcgc
ccgatcaagtcctcctaccgcgagggcctgtcggttttggagtacttcattgctactcac
ggtgctcgtaagggtctggccgataccgctctgcgtacggctaactccggttacctgacg
cgtcgtttggttgacgtttcacaggatgtcatcgttcgcgaagacgactgtggcaccgag
cgcggattgaccctgcccatcgcagtggttgattccatgggtgagtttgtgctgcacgag
gaagtcgagaacagcgtttacgctcgtaccttggctgccgaggtagttgactcctcaggt
accgttctggccgaggccggagacgacgtcggagatgtcctcattgccaagctgttcgca
gccggcatcgaagagatcaaggtccgctccgtactcacctgtgagtccacggttggaacc
tgtgcactgtgctacggccgctcactggccacgggtaagaccgtggacattggtgaggct
gtcggtattatcgccgctcagtccattggtgagcccggtactcagctgaccatgcgtacc
ttccacaccggtggtgctgtttccgccagccgtggcgaggacatcacccagggtctgccc
cgtattcaggagctcttcgaagcacgtacccccaagggtgttgctccgatcgcagaagct
gccggtcgcatcaacattgatgagtccgagaagaccatgcgtttgatcctgacaccggac
gacggcacagaggagatcgcttacccggtcctccgacgcgcacgtctgacggttgccgac
ggcgagcacgttgaagttggccagaagctgattgtgggtgcagttgaccccaagcaggtt
ctgcgtatcctcggcccgcgtgccgctcagaagcacctcgttgaggaagttcagggcgtt
taccgcagccagggtgtgggtatccacgacaagcacgtcgaggttatcgtccgccagatg
cttcgccgcgtcacggtcatcgagtccggtgactcgaagctgctgccgggtgagcttgcc
gagcgcggccgcttcgagacggaaaaccgtcgcgtcgtgtccgagggcaagaagcctgca
tcaggccgtaacgagctcatgggtatcaccaaggcttccttggctaccgaatcatggctc
tccgctgcttccttccaggaaaccacccgcgttctgacgcaggcggccatggaaggcaag
tctgacccgttgctgggtctgaaggagaacgtgatcatcggtaagttgatccccgctggt
accggtcttccgcgctacaccaacgtcacggtggagcccacagaagaagccaaggccaac
ctgttcaccggtccgagcgctttcagcgactttgactacgtgggcggcgttggagacttg
ggcgccgagttccgtgccatccccttggatgactacgatctgggcaccaacttctccggc
tag
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integrated database retrieval system
