KEGG   Arthrobacter alpinus A3: MB46_18190
Entry
MB46_18190        CDS       T04228                                 
Name
(GenBank) ribonuclease
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
arw  Arthrobacter alpinus A3
Pathway
arw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:arw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MB46_18190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arw03019]
    MB46_18190
Messenger RNA biogenesis [BR:arw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MB46_18190
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 Fn3_Dep-1_1st
Other DBs
NCBI-ProteinID: ALV47130
UniProt: A0A0U3QP60
LinkDB
Position
4044656..4046329
AA seq 557 aa
MRRTARQTPPALADGAMRIVALGGLGEIGRNMTVFEFAGKLLIVDCGVLFPEEHHPGVDV
IIPDFSYLKNRWQDVVGLVLTHGHEDHIGGVPYLLKHRGDIPVISAKLTLAFLKTKLDEH
RIKGKLVQVKEGDRRKFGPFDVEFLAVNHSIPDGLAVAIRTPAGLVLETGDFKMDQFPLD
KRITDLAGFARLGEEGVDLFLPDSTNAEVPGFLAAEADLIPAIDQVMRTAPRRVVVSSFA
SHVHRIQQIIDSAHKYNRKIAFVGRSMVRNMTTARELGYLKIPRGMLVDAKELERMAPNK
AVLICTGSQGEPMAALARMASGDHQINLTEGDTVLLASSLVPGNESSIYRLINDLTKQGA
NVVHKGNAKVHVSGHASAGELVYCYNLVRPKNVMPVHGEYRHLKANAELAVRTGVDPKNA
FILEDGTTIDLKDGVVKVSGSVPAAYVYVENMIPGAATEESLQDRIRLAEDGAVTVLLIV
DPDSGKIEEDPEYFAVGFNLAEKDTDKATVIVEKTIASLRGEKTGHGAEKAIAEALLRWS
DRALRRKPVYTVIIVEA
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgagaagaacagctcgccaaacccctcccgccctcgccgacggtgccatgcgcatcgtg
gccctcggtggtttgggcgaaattggccgaaacatgaccgtcttcgagttcgcaggaaag
ctgctgattgttgactgcggcgtgctgttcccagaggagcaccaccccggcgttgacgtc
atcatccccgatttctcgtacctgaagaaccgctggcaggacgttgttggcctggtgctg
actcacggccacgaggaccacattggcggtgtcccgtacctgctcaagcaccgcggcgac
attcccgtgatctccgcgaagctgacccttgcgttcctgaagaccaaacttgatgaacac
cgcatcaagggcaagctggtccaggtcaaggaaggcgaccgccgcaagttcggcccgttc
gacgtcgaattccttgccgttaaccactccatcccggacggcctggctgtcgccatccgt
acgcccgccggcctcgtgctggaaaccggcgacttcaagatggaccagttcccgctggac
aagcgcatcaccgacctggccggctttgcccgtctgggtgaggaaggcgtggacttgttc
ctgcctgactccaccaacgccgaggttccgggcttcctggcagccgaggctgacctgatc
ccggctatcgaccaggtcatgcgcacagccccgcgccgtgttgttgtctccagcttcgcg
agccacgtgcaccgcatccagcagatcatcgactctgcccacaagtacaaccgcaagatc
gccttcgttggccgctccatggtccgcaacatgaccactgcgcgcgaacttggctacctg
aagattccgcgcggcatgctggttgacgccaaggaacttgagcgcatggcccccaacaag
gccgttctcatttgcaccggttcacagggtgagcccatggctgccctagcgcgtatggcc
agcggcgatcaccagatcaacctcaccgagggcgacaccgtcctgttggccagctcgctg
gttcccggcaacgagtcctcgatctaccgcctcatcaacgacctcaccaagcagggcgcc
aacgttgtccacaagggcaacgccaaggtgcacgtctccggtcacgccagtgccggcgag
ctcgtgtactgctacaacctggttcgcccgaagaacgtcatgcccgtgcacggtgaatac
cgtcacctgaaggctaacgccgagctggctgtccgcaccggtgttgacccgaagaatgcg
ttcatccttgaagacggcaccacgatcgacctcaaggacggcgttgtcaaggtatccggt
agcgttccggctgcttacgtctacgttgagaacatgattccgggtgcggccaccgaggag
tccctgcaggatcgtattcgtttggccgaagacggtgcggttaccgttctgctgatcgtt
gatcccgacagcggcaagatcgaagaagacccggagtacttcgccgtgggcttcaacctc
gccgagaaggacaccgacaaggccaccgtaatcgttgagaagaccattgcttctctccgc
ggcgagaagacgggccacggcgccgagaaggctatcgccgaggcactgctgcgttggtcg
gaccgcgcactgcgccgcaagccggtctacacggtcatcatcgtcgaggcataa

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