Arthrobacter alpinus A3: MB46_18190
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Entry
MB46_18190 CDS
T04228
Name
(GenBank) ribonuclease
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
arw
Arthrobacter alpinus A3
Pathway
arw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MB46_18190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arw03019
]
MB46_18190
Messenger RNA biogenesis [BR:
arw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MB46_18190
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Fn3_Dep-1_1st
Motif
Other DBs
NCBI-ProteinID:
ALV47130
UniProt:
A0A0U3QP60
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Position
4044656..4046329
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AA seq
557 aa
AA seq
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MRRTARQTPPALADGAMRIVALGGLGEIGRNMTVFEFAGKLLIVDCGVLFPEEHHPGVDV
IIPDFSYLKNRWQDVVGLVLTHGHEDHIGGVPYLLKHRGDIPVISAKLTLAFLKTKLDEH
RIKGKLVQVKEGDRRKFGPFDVEFLAVNHSIPDGLAVAIRTPAGLVLETGDFKMDQFPLD
KRITDLAGFARLGEEGVDLFLPDSTNAEVPGFLAAEADLIPAIDQVMRTAPRRVVVSSFA
SHVHRIQQIIDSAHKYNRKIAFVGRSMVRNMTTARELGYLKIPRGMLVDAKELERMAPNK
AVLICTGSQGEPMAALARMASGDHQINLTEGDTVLLASSLVPGNESSIYRLINDLTKQGA
NVVHKGNAKVHVSGHASAGELVYCYNLVRPKNVMPVHGEYRHLKANAELAVRTGVDPKNA
FILEDGTTIDLKDGVVKVSGSVPAAYVYVENMIPGAATEESLQDRIRLAEDGAVTVLLIV
DPDSGKIEEDPEYFAVGFNLAEKDTDKATVIVEKTIASLRGEKTGHGAEKAIAEALLRWS
DRALRRKPVYTVIIVEA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaacagctcgccaaacccctcccgccctcgccgacggtgccatgcgcatcgtg
gccctcggtggtttgggcgaaattggccgaaacatgaccgtcttcgagttcgcaggaaag
ctgctgattgttgactgcggcgtgctgttcccagaggagcaccaccccggcgttgacgtc
atcatccccgatttctcgtacctgaagaaccgctggcaggacgttgttggcctggtgctg
actcacggccacgaggaccacattggcggtgtcccgtacctgctcaagcaccgcggcgac
attcccgtgatctccgcgaagctgacccttgcgttcctgaagaccaaacttgatgaacac
cgcatcaagggcaagctggtccaggtcaaggaaggcgaccgccgcaagttcggcccgttc
gacgtcgaattccttgccgttaaccactccatcccggacggcctggctgtcgccatccgt
acgcccgccggcctcgtgctggaaaccggcgacttcaagatggaccagttcccgctggac
aagcgcatcaccgacctggccggctttgcccgtctgggtgaggaaggcgtggacttgttc
ctgcctgactccaccaacgccgaggttccgggcttcctggcagccgaggctgacctgatc
ccggctatcgaccaggtcatgcgcacagccccgcgccgtgttgttgtctccagcttcgcg
agccacgtgcaccgcatccagcagatcatcgactctgcccacaagtacaaccgcaagatc
gccttcgttggccgctccatggtccgcaacatgaccactgcgcgcgaacttggctacctg
aagattccgcgcggcatgctggttgacgccaaggaacttgagcgcatggcccccaacaag
gccgttctcatttgcaccggttcacagggtgagcccatggctgccctagcgcgtatggcc
agcggcgatcaccagatcaacctcaccgagggcgacaccgtcctgttggccagctcgctg
gttcccggcaacgagtcctcgatctaccgcctcatcaacgacctcaccaagcagggcgcc
aacgttgtccacaagggcaacgccaaggtgcacgtctccggtcacgccagtgccggcgag
ctcgtgtactgctacaacctggttcgcccgaagaacgtcatgcccgtgcacggtgaatac
cgtcacctgaaggctaacgccgagctggctgtccgcaccggtgttgacccgaagaatgcg
ttcatccttgaagacggcaccacgatcgacctcaaggacggcgttgtcaaggtatccggt
agcgttccggctgcttacgtctacgttgagaacatgattccgggtgcggccaccgaggag
tccctgcaggatcgtattcgtttggccgaagacggtgcggttaccgttctgctgatcgtt
gatcccgacagcggcaagatcgaagaagacccggagtacttcgccgtgggcttcaacctc
gccgagaaggacaccgacaaggccaccgtaatcgttgagaagaccattgcttctctccgc
ggcgagaagacgggccacggcgccgagaaggctatcgccgaggcactgctgcgttggtcg
gaccgcgcactgcgccgcaagccggtctacacggtcatcatcgtcgaggcataa
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