Arthrobacter sp. ZXY-2: ARZXY2_3143
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Entry
ARZXY2_3143 CDS
T05201
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
arx
Arthrobacter sp. ZXY-2
Pathway
arx03030
DNA replication
arx03430
Mismatch repair
arx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ARZXY2_3143 (holB)
03430 Mismatch repair
ARZXY2_3143 (holB)
03440 Homologous recombination
ARZXY2_3143 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arx03032
]
ARZXY2_3143 (holB)
03400 DNA repair and recombination proteins [BR:
arx03400
]
ARZXY2_3143 (holB)
Enzymes [BR:
arx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ARZXY2_3143 (holB)
DNA replication proteins [BR:
arx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ARZXY2_3143 (holB)
DNA repair and recombination proteins [BR:
arx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ARZXY2_3143 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
AAA_16
Mg_chelatase
AAA_22
DNApol3-delta_C
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
AOY72663
LinkDB
All DBs
Position
3275587..3276738
Genome browser
AA seq
383 aa
AA seq
DB search
MSVWDDLQGQAPVVAQLKQAAQSESGLTHAWLFTGPPGSGRSNAAKAFAAALNCQQDDVT
LRGCGECPACHTILGETHSDVTFVRTEKVTITIDEARELVAKAGDRPSTGRWRIIVVEDA
DRMAERTTNVLLKAIEEPTPRTIWMLCAPSPADVLVTIRSRCRPVTLRLPPASDVADLLV
RRDGVERGLAERAARAAQSHIGIARRLARDADARERRLETVRIPLGLRGVTAAVMMAEKL
VKIATEEANSSNDERDAAEKVALLASLGAPESGTLPPSMRSQVKQLEDDQKRRAKRSVTD
SLDRTLTDLLSFYRDVLIIQLGNAVDLVNVELQSELEEYARQSAPETTLARMDAINKARV
RITTTNVAPLLAVESMATSLIQQ
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtatgggatgacctgcagggacaagccccggtagtcgcacagttgaaacaggcc
gcccagtcagagagcggcctgacccatgcgtggctgttcacgggtccgcccggatccggc
cgttccaatgccgccaaggccttcgctgcggccctcaactgccagcaggacgacgtcact
ttgcggggctgcggcgaatgccccgcgtgccacaccatccttggcgaaacacactcggac
gttacgttcgtgcggaccgagaaagtcaccatcaccattgacgaggcccgggaattggtg
gccaaagccggcgaccggccttccaccggccgttggcgcatcatcgtggtggaggacgcc
gaccgcatggccgaacggaccaccaacgtgctgctcaaagccatcgaggagcccactccc
cggaccatatggatgctgtgcgcaccctccccggcagatgtgctcgtaaccattcgttcg
cgatgccgcccggtgaccttgcgcttgcctcctgcctccgacgtcgccgatcttttggtg
aggcgcgacggagtcgaacgtggccttgccgagcgggccgcacgcgcggcacagagccac
atcggcatcgcccggcgactggcacgcgacgccgacgcccgggaacgccgtttggaaaca
gtccgcattccgcttggcctgcgcggagtaacggcagcggtgatgatggccgaaaagctg
gtgaagatcgccacggaagaggccaacagttccaacgacgaacgcgacgctgcggaaaaa
gtggcattgttggcaagcctcggggcgcccgaatccggcacccttccgccgtcgatgcgc
agccaggtcaagcagctggaagacgaccaaaagcgccgcgccaagcgctccgtcacggat
tcgctggaccggaccctgacggacctgttgtccttctaccgtgatgtcctcatcatccag
cttgggaacgcggtggacttggttaacgttgagctacaaagcgagctggaagagtacgcg
cgccagtccgcccccgaaaccacgctcgcccggatggacgccatcaataaggcacgcgtc
cgcatcaccactaccaacgtggcaccgctgttggcagtggagtcaatggctacaagcctg
atccagcaatag
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