Arthrobacter sp. ZXY-2: ARZXY2_947
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Entry
ARZXY2_947 CDS
T05201
Symbol
uvrD
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
arx
Arthrobacter sp. ZXY-2
Pathway
arx03420
Nucleotide excision repair
arx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ARZXY2_947 (uvrD)
03430 Mismatch repair
ARZXY2_947 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arx03400
]
ARZXY2_947 (uvrD)
Enzymes [BR:
arx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ARZXY2_947 (uvrD)
DNA repair and recombination proteins [BR:
arx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ARZXY2_947 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ARZXY2_947 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AOY70508
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All DBs
Position
976297..979800
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AA seq
1167 aa
AA seq
DB search
MTIDLLDGMGTTAATDPRSHEPLPVRFTPSELAGILGEKNRPTPEQASIIESPLTPRLVI
AGAGSGKTATMADRVVWLVANGWVRPEEVLGVTFTRKAAGELASRIRAKLATLQRIAAED
DGRLGFPESLANADDLEPKVSTYHSYASSIVSDYGLRLGIERDVVLLGSAQSWQLASQTV
EAYDGTFEHFTAAKSTLVNAVIQLAGECAEHLREPDAVREWILEKVGVLTRLPYVAGSKK
NPTQGALDMAAMLRTRASVADMVVRYQEAKRQRGVLDFGDLVALAARIARDIPLAAATER
ARYKVVLLDEFQDTSHAQLVLFSRLFGDGHAVTAVGDPNQSIYGFRGASAGQLFHFVHEF
PVRLTAPARGEPGLAPAPTSYLTTAWRNGRNILTAANTIAAPLNQEASKDGPAGDRTRSG
GVQVPPLVPSPAAVEGAVVMGRFQTDEQEAAALARDVRRYQRTIFEEEKDGTPVRPTMAV
LCRRRAQMECLRREFEVQGIDYQIVGLGGLLDTPEIVDLVATLRVLADPGRSDALMRLLA
GARWRIGPADLMAFSDWSRYLARRRSSPGVQTAFPDDHEDPQAVVVESDLTDSASLVEAL
DYLPQAGWTSAQGRTISGEALGRLAKLSAELRVLRSYIGDDLTTLLGEVERAMLLDIEVA
AKPGVSIHQARRNLDAFQDAAAGFLQTSQRIDLLAFLSWLEAAASEEGGLDAAPVEANRE
AIQLLTVHASKGLEWDVVFVPGLNSGSFPSNRDSRWSSGSSALPWPLRGDHADLPQWDLD
QPDQKGWLDAEKAFKADVQHHGEAEERRLAYVAYTRAKFVLWVSSAAWNGSRAGIAEMSP
FLSELAQLADHGAAGIHPESVSEEALPQSSPLTTTVEVALFPYDPLEGPSDPRSGNRLRL
APGRRAAMDRAAELVRGFIGDHGSEPPLPQENTAAHGRFLRWSEEAALLLARHGRHSSEQ
AVHLPSHISASLFVDLGTDPAAVLAQLRRPVPREPGMSARKGTAFHAWVEEYFGTTGMLD
LDEAPGADAHIDDAYGLKEMAEAFKQSEWAHRAPAFVEVPVETKIGDVVVRGRIDAVFRD
ADGRWHLIDWKTGRRPSGKQLEARAVQLAVYRLAWARLQQVPLEDVSAAFYYVAEDAVVR
PHDLGTAEELEGIIAKALLHNGGGRGQ
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgatcttctggacgggatgggcacaactgctgcaaccgatccccgctcccat
gaaccgctcccggtccggtttacgccttctgagcttgcgggcatccttggcgagaagaac
aggccaactccggaacaagcaagcatcattgaatccccgctgactccccggctggtcatc
gccggcgcgggttccggcaagaccgccaccatggcggaccgggtggtgtggctggtcgcc
aacggctgggtgcgtcctgaagaggttctgggggttacgtttacccgcaaggctgccggt
gagttggccagccggatccgggccaagctcgctacgcttcaacgcattgctgccgaagat
gatggccggcttggctttccggagagcctggccaacgccgacgacctcgagcccaaggta
tccacctaccactcgtatgcgagcagcatcgtgtccgattacggattgcgcctgggcatc
gaacgggacgtcgtcctgctggggagcgcccagtcgtggcaattggccagccagaccgtt
gaggcttacgacggtaccttcgagcatttcacggccgctaagtccactcttgtcaatgcc
gtcatccagctcgcgggtgaatgtgccgagcatctccgggagccggacgcggtgcgggaa
tggatcctggaaaaggtcggggtcctgacccggttgccttacgttgccggttccaaaaag
aatccaacccaaggcgccttggacatggcagcgatgctgcgcacgcgggccagcgtggct
gatatggtggtccgctaccaggaagccaaacggcaaaggggcgtcctggacttcggggac
ctcgtagcgctggccgcgcggattgcccgcgatattccgttggcagcggccactgaacgg
gcacggtacaaggtggtcctccttgacgagttccaggacacctcacacgcccaattggtg
ctcttctcccggcttttcggggacggccatgccgtgactgccgtgggcgatcccaaccag
tccatttacgggttccggggagcttcggccgggcagttgttccatttcgtgcacgagttc
ccggtccgcctcacagccccggcacgcggagagcctggcttggctccggcgcccacctcc
tacctcactactgcgtggcggaacggccggaacatcctcacggctgccaacaccattgcc
gcaccgttgaatcaggaagcctccaaagacggcccggccggtgaccgtaccagatccggc
ggagtgcaggtgccgccgttggtccccagcccggcggcggtggagggcgctgtcgtcatg
ggccgtttccagacggacgaacaggaggccgcagccctggccagggatgtccgccggtac
cagcgaaccatctttgaggaggagaaagacggaacgccggtcaggcccaccatggccgta
ctttgccggcgtcgagcccagatggagtgcctgcgccgggagttcgaggtccagggcatc
gattaccagatcgtgggcctcggaggcctgcttgatacgccggagatcgtggacctggtg
gctacgctccgcgtactggccgatcccggacgctccgatgcattgatgcggttgttggcg
ggggcacgctggcggatcggtccggcagacctcatggcattcagtgactggtcacgctac
ctggcgcgtcgccggtcaagccccggggtgcagacggccttccctgatgaccatgaggat
ccgcaggccgtcgtggtggaaagcgatctcacggactcggccagtctcgtcgaggccctg
gactacctgcctcaggccgggtggacctcggcgcagggaaggaccatcagcggggaggcc
ctgggccgcctcgcaaagctgtccgcggagttgcgtgtgctgcgcagctacatcggtgac
gacctcacgacgcttttgggtgaggtggaacgggccatgctcctggacatcgaagtagcg
gccaagccgggtgtcagcattcatcaggcccggcgcaacctggacgcgttccaggacgcc
gccgcaggattcctgcagacgtcgcagcggatcgatctgctggctttcctgtcgtggttg
gaagccgcggcctcggaggaaggcggcttggatgcagctcccgtagaggcgaaccgggaa
gcgatacagctgctgacagtccatgcttccaagggcctggagtgggacgtggtcttcgtg
ccgggcctgaattccgggtctttccccagcaaccgtgactcgcgctggagcagtggctcg
tccgccctgccgtggccgctgcggggggaccacgcggaccttccacagtgggatcttgac
cagcctgaccagaagggatggctcgacgcagagaaggccttcaaagccgacgttcaacac
catggcgaggccgaggagcggcgcctcgcctatgttgcctacacgcgggcaaagtttgtg
ctgtgggtctcaagcgccgcctggaacggttccagggcgggtattgcagagatgtcgccc
ttcttatcggaattggcccaactcgcagaccacggcgcagcggggatccacccggaatca
gtgtccgaggaagcactgccgcagtcgagtccgctgacaaccacagttgaggtagcgctc
tttccttacgatcccttggaagggccgtcggatccccgtagtggcaaccgcctgcggctg
gcccccggtcgtcgtgcggcaatggacagggcagcggaactggttcgcgggttcatcggg
gatcacgggtcagagccacccttgccacaggaaaacacggcggcgcacgggcggttcctg
cgctggtcggaagaagctgcacttctgctcgcgcgccatggccggcactcttcggagcaa
gccgtccatctgcccagccatatctcggcctcgctgtttgtcgacttgggaaccgatccc
gcggcagttctggcacagttgcgcagaccggtgccacgggaaccgggaatgtccgcgcgg
aagggaactgccttccacgcttgggtggaagagtacttcggaaccaccggaatgttggac
ctcgacgaggccccgggagcggacgcccacatcgacgacgcctacgggctcaaggaaatg
gctgaggcgttcaaacagtctgagtgggcacacagggcacctgccttcgtggaagtaccc
gtggagacgaagatcggggacgtcgtggtccgcggcaggatcgatgccgtcttccgcgac
gcagacggccgctggcatttgattgactggaaaacgggtcggcgcccctcaggaaagcaa
ttggaggcacgggcggtccagttggctgtttaccgcctggcctgggcgaggctccagcag
gttccgctggaggatgtcagcgctgccttttattacgtcgctgaggacgccgttgtgcgt
ccgcatgacctcggaacggctgaagagcttgaaggcatcatcgccaaggccctgctccac
aacggtggcgggagagggcaataa
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integrated database retrieval system
