Arthrobacter sp. YC-RL1: ATC04_04495
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Entry
ATC04_04495 CDS
T04187
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ary
Arthrobacter sp. YC-RL1
Pathway
ary00260
Glycine, serine and threonine metabolism
ary00460
Cyanoamino acid metabolism
ary00630
Glyoxylate and dicarboxylate metabolism
ary00670
One carbon pool by folate
ary00680
Methane metabolism
ary01100
Metabolic pathways
ary01110
Biosynthesis of secondary metabolites
ary01120
Microbial metabolism in diverse environments
ary01200
Carbon metabolism
ary01230
Biosynthesis of amino acids
ary01240
Biosynthesis of cofactors
ary04981
Folate transport and metabolism
Module
ary_M00140
C1-unit interconversion, prokaryotes
ary_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ary00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ATC04_04495
09102 Energy metabolism
00680 Methane metabolism
ATC04_04495
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ATC04_04495
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ATC04_04495
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ATC04_04495
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ATC04_04495
Enzymes [BR:
ary01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ATC04_04495
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
IPPT
Motif
Other DBs
NCBI-ProteinID:
ALQ29879
LinkDB
All DBs
Position
968274..969596
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AA seq
440 aa
AA seq
DB search
MSNKTYESLAPASLTQSLAELDPEVAQRIDAELARQQRGLEMIASENHTAQAVMQAQGSV
LTNKYAEGYPGRRYYGGCEEVDVIETLAIERVKELFGAKFANVQPHSGAQANASVYHALV
RPGDTVLGLNLAHGGHLTHGMKINFSGRLFNIVPYGVDEETNLVDMDEVERLAIEHQPKM
IVAGWSAYPRQLDFVRFREIADKVGAYLFVDMAHFAGLVATGLHPSPVPHAHVVTSTTHK
TLAGPRGGIILSNDAEIAKKLNSAVFPGQQGGPLEHVIAGKAVAFKIAASPEFKERQQRT
LAGSRILAERLTQADVAAKGISVLTGGTDVHLVLVDLRHSELDGQQAEDLLAQVEITVNR
NSVPFDPRPPMTTSGLRIGTPALATRGFSEEAFAEVAEIIAQTLIAGAEGNTGVLPALKA
RVLELAAAHPLYPELAKVSE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaagacttatgaatcactggcaccggcatcgctgacccagtccctggccgag
ctggatccagaggtcgcgcagcgtatcgatgctgagctggcccgccagcagcgcggcctg
gaaatgatcgcctcggaaaaccacacggcccaggccgtgatgcaggcgcagggttcggtg
ctgaccaacaagtacgccgagggctacccgggccgccgctactacggcggctgcgaagag
gtcgacgtcatcgagaccctggccatcgagcgcgtcaaggaactgttcggcgcgaagttc
gccaacgtccagccgcactccggggcccaggccaacgcgtcggtctaccacgcgctggtg
cgtccgggcgataccgtgctgggcttgaacctggcccacggcgggcatttgacccacggc
atgaagatcaacttctccggccgcctgttcaacatcgtcccgtacggcgtggacgaggag
acgaacctggtggacatggacgaggtcgagcgcctggccatcgagcaccagccgaagatg
atcgtggccggctggtcggcctaccctcgccagctggacttcgtccgcttccgcgaaatc
gcggacaaggtcggtgcgtacctgttcgtggacatggcgcatttcgccggcctggtcgcg
accgggctgcacccgtcgccggtgccgcatgcgcatgtggtcacctcgaccacgcacaag
accctggcaggccctcgcggcggcatcatcctgtcgaatgatgcggagatcgccaagaag
ctgaactcggcggtgttccctggccagcagggcggcccgctggagcatgtgatcgcgggc
aaggcggtggcgttcaagatcgccgcgtcgccggagttcaaggagcgccagcagcgcacc
ctggccggttcgcggatcctggccgagcggttgacccaggccgatgtggccgccaagggc
atcagcgtgttgaccggcggcacggatgtgcacctggtgctggtggacctgcgccacagc
gagctggatgggcagcaggccgaggatctgctggcgcaggtggagatcacggtgaaccgc
aattcggtgccgtttgatccgcgtccgccgatgactaccagcgggttgcggatcggcacc
ccggcgttggcgacccgcgggttctccgaggaggcgtttgccgaggttgcggagatcatt
gcgcagaccctgattgccggggccgagggcaacaccggggtgttgccggcgttgaaggcc
cgggttctggagctggccgcagcccacccactgtacccggagctggccaaggtttccgag
tag
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