KEGG   Arthrobacter sp. YC-RL1: ATC04_04745
Entry
ATC04_04745       CDS       T04187                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
ary  Arthrobacter sp. YC-RL1
Brite
KEGG Orthology (KO) [BR:ary00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ary03032]
    ATC04_04745
   03036 Chromosome and associated proteins [BR:ary03036]
    ATC04_04745
   03400 DNA repair and recombination proteins [BR:ary03400]
    ATC04_04745
DNA replication proteins [BR:ary03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    ATC04_04745
Chromosome and associated proteins [BR:ary03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    ATC04_04745
DNA repair and recombination proteins [BR:ary03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      ATC04_04745
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF2267
Other DBs
NCBI-ProteinID: ALQ29926
UniProt: A0A9X0FGR3
LinkDB
Position
1024101..1024385
AA seq 94 aa
MAMNRSELVAAVAAKTENSQVAVNGVLDAVFDVFVEQISQGEKVSIPGWLAVERTDRAAR
TGRNPQTGEAIEIPAGHSVKLTAGSKLKAAVAKK
NT seq 285 nt   +upstreamnt  +downstreamnt
ttggctatgaaccgtagcgaacttgttgccgctgttgcagcgaagaccgaaaactcccag
gttgccgtcaacggtgttctggatgctgttttcgacgttttcgttgagcagatctcgcag
ggcgagaaggtttcgatcccaggctggctggcagtggagcgcaccgaccgtgcagctcgc
accggccgcaacccgcagaccggcgaagccatcgagattcctgccggccactcggtgaag
ctgaccgctggttcgaagctgaaggccgctgtcgccaagaagtag

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