Arthrobacter sp. YC-RL1: ATC04_05210
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Entry
ATC04_05210 CDS
T04187
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ary
Arthrobacter sp. YC-RL1
Brite
KEGG Orthology (KO) [BR:
ary00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ary03032
]
ATC04_05210
03400 DNA repair and recombination proteins [BR:
ary03400
]
ATC04_05210
Enzymes [BR:
ary01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ATC04_05210
DNA replication proteins [BR:
ary03032
]
Prokaryotic type
DNA Topoisomerases
ATC04_05210
DNA repair and recombination proteins [BR:
ary03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ATC04_05210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
HC2
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
ALQ30013
UniProt:
A0A9X0K2N4
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All DBs
Position
1127482..1130271
Genome browser
AA seq
929 aa
AA seq
DB search
MPAKAKEKTGKKLVIVESPAKVKSIAKYLGEGFDVDASVGHIRDLPQPSELPTELKKTSV
GKFAVDLDNDFEPYYVVYPDKKKRVSELKAKLKEADELYLATDADREGEAIAWHLLQVLK
PKVPVRRLAFTEITKEGIARALENMRELDTDLVDAQETRRVLDRLYGYEISPVLWRKVAR
GLSAGRVQSVATRLVVERERERMAFISAGYWDIKGTFATSNGESFAAKLSAVDGARVASG
RDFDDRGQLKTARTKLAHLDQASAESLVANLANTDFAVTSVEDKPYTRRPAAPFTTSTLQ
QEASRKLRWSSKLTMQIAQRLYENGYITYMRTDSVFLSNEAVTAARKQATELYGAESVPD
KPRVYKAKSDAAQEAHEAIRPAGDMFRRPTDVRSSLSKDEYTLYELIWKRTVASQMADAK
GFTATIKLAGTASDSRVAEFSASGTVITFRGFLSAYEEGKDQERSENAESENAEARLPQL
ATGQQLAGDELTALGHETTPPARYTEASIVAELEKREIGRPSTYAPTISTIMDRGYVTKR
GGALVPSWIAFSVIRLLEEHFAQYVDYDFTARLEDDLDEIAKGQRARTDWLNLFYFGKDN
SEGLKHVVENLGDIDARAINSIKITDDITLRVGKFGPYLERALPEGAEEGTEPQRANVPE
DLAPDELTAEKAEELFANSKVSEKELGVDPETGRKIVAKDGRYGAYVTEVIPELTEAEIA
ALPVEYYKNGKPKPPKKPAKVKPRTGSLFKSMSVETVTLEDALKLLSLPRVLGTDAEGEE
ITVQNGRFGPYLKKGSDSRSIESEEQIFTITLDEALAIYAQPKQRGRRAAVPPLAEFGVD
PTSEKNIVVKDGRFGPYITDGVTNITVPRGTSLEELTREQAIELLADKRARGPVKRTAAK
KAPAKKAPAKKPAAKKAPAKKPAAKSTEK
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgccaaggccaaggaaaagaccggtaagaaactcgtcatcgtcgagtctcctgcc
aaggtgaagtcgatcgccaagtatttgggtgagggcttcgatgtggacgcctcggtgggc
cacatccgtgatcttccgcagccctcggagcttccaaccgagctgaaaaagacctcggtc
ggcaagttcgccgtggacctggacaacgacttcgagccgtattatgtcgtctacccggac
aagaagaagcgcgtctccgagctgaaggcaaagctcaaggaagccgacgaactctacctc
gcaaccgatgcggaccgcgaaggcgaagccatcgcgtggcacctgctgcaggtcctgaag
cccaaggttccggtacgccgcctggcgttcaccgaaatcaccaaggaaggcatcgcccgc
gcactggagaacatgcgcgagctggacaccgacctggtcgacgcgcaggaaacccgccgc
gtgctggaccgcctctacggctacgagatctccccggtgctctggcgcaaggtcgcccgc
ggcctgtccgccggccgtgtgcagtccgtggccacccgactggtcgtggagcgcgagcgc
gagcgcatggcgttcatctccgccggctactgggacatcaagggcaccttcgccacctcc
aacggcgaatccttcgccgccaagctctcggcagtggacggcgcccgcgttgcctccggc
cgcgacttcgacgaccgcggccagctcaagaccgcccgcaccaagctggcgcatctggac
caggcctcggccgagtccctggtggcgaacctggccaacaccgacttcgccgtcacctcg
gtcgaggacaagccgtacacccgccgtccggcggccccgttcaccacctccacgctgcag
caggaagccagccgcaagctgcgctggagctccaagctgaccatgcagatcgcccagcgc
ctgtatgaaaacggctacatcacctacatgcgtaccgactcggtgttcctgtccaacgag
gcagtcaccgcggcgcgcaagcaggccaccgagctctacggcgcggaatccgtgccggac
aaaccgcgtgtctacaaggccaagtccgacgccgcccaggaagcccacgaagccatccgc
ccggccggcgacatgttccgccgcccgaccgacgtgcgctcctcgctgtccaaggacgaa
tacaccctctacgagctgatctggaagcgcaccgtcgcctcccagatggccgacgccaag
ggtttcaccgccaccatcaagctcgccggcaccgccagcgactcccgtgtggccgaattc
tccgcctccggcaccgtgatcaccttccgcggcttcctgtccgcctacgaggagggcaag
gaccaggagcgctcggagaacgcggagtccgagaacgccgaagcccgcctgccgcagctg
gctaccggccagcagctggccggcgacgagctgaccgcgctgggccacgaaaccaccccg
ccggcccgctacaccgaggcctcgatcgtggccgagctggaaaagcgcgagatcggccgc
ccgtcgacctacgcgccgaccatctccaccatcatggaccgcggctacgtcaccaagcgc
ggcggcgccctggtcccgagctggatcgcgttctccgtgatccgcctgctcgaagagcac
ttcgcccagtacgttgactacgacttcaccgcccgcctggaagacgacctggacgagatc
gccaagggccagcgcgcccgcaccgactggctgaacctgttctacttcggcaaggacaac
tccgagggcctgaagcacgtggtggagaacctgggcgacatcgatgcccgagccatcaac
tccatcaagatcaccgacgacatcacgctgcgcgtgggcaagttcggaccgtaccttgaa
cgcgccctacccgagggcgccgaggaaggcaccgagccgcagcgcgccaacgtgcccgaa
gacctggcgccggacgaactgaccgcggaaaaggccgaggagctgttcgccaattccaag
gtctcggagaaggaactgggtgtggacccggaaaccggccgcaagatcgtggccaaggac
ggacgctacggcgcctacgtcaccgaggtcatcccggagctgaccgaagcggaaatcgcg
gccctgccggtcgaatactacaagaacggcaagcccaagcccccgaagaagccggccaag
gtcaagccgcgcaccggcagcctgttcaagtccatgtccgttgagaccgtgacgctggag
gacgcgctgaagctgctgagcctgccgcgcgtgctgggcaccgacgccgagggcgaagag
atcaccgtgcagaacggccgcttcggcccgtacctgaagaagggcagcgactcgcgctcc
atcgagagcgaggagcagatcttcaccatcaccctggacgaggccctggccatctatgcg
cagcccaagcagcgcggccgccgcgccgcggtgccgccactggcggagttcggcgtggac
ccgaccagcgagaagaacatcgtggtgaaggacggccgcttcggcccgtacatcaccgac
ggcgtcaccaacatcaccgttccgcgcggcacgtctctggaggagctgacccgcgagcag
gccatcgagctgctggcggataagcgcgcccgcggcccggtgaagcgcaccgcggcgaag
aaggcgcctgccaagaaggctccggccaagaagccggcagccaagaaggctccggccaag
aagcccgccgcgaagagcaccgagaagtag
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