Arthrobacter sp. YC-RL1: ATC04_06250
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Entry
ATC04_06250 CDS
T04187
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ary
Arthrobacter sp. YC-RL1
Pathway
ary03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ary00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ATC04_06250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ary03021
]
ATC04_06250
03400 DNA repair and recombination proteins [BR:
ary03400
]
ATC04_06250
Enzymes [BR:
ary01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ATC04_06250
Transcription machinery [BR:
ary03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ATC04_06250
DNA repair and recombination proteins [BR:
ary03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ATC04_06250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ALQ30202
UniProt:
A0A9X0FGE4
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All DBs
Position
1326774..1327775
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AA seq
333 aa
AA seq
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MLITQRPTLTEEVVAENRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSIRIDGVL
HEFTTVAGVKEDVTELVLNIKNLSVSSEHDEPVVAYLRKQGPGVVTAADITPPAGVEFHN
PDLHIATLNANGKFDMELTIERGRGYVSASQNKSADGEIGRIPVDSIYSPVLKVTFRVEA
TRVEQRTDFDRLIVDVETKESITPRDAVASAGTTLVELFGLFRELNTAAEGIEIGPSPTD
AALAADMALPIEDLELTVRSYNCLKREGIHSVGELVTRSEADLMDIRNFGAKSIDEVKAK
LVELGLALKDSPPGFDLAARSAIDDGDDYDEGL
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattacgcagcgcccaaccctgaccgaagaagtagttgccgaaaaccgctcccgt
ttcgttatcgaaccgctggagccaggctttggttacacccttggtaactcgctccgccgc
accctgctgtcctcgattcctggtgcatccgtcaccagcattcgtatcgacggcgtgctg
cacgagttcaccaccgtagccggtgtcaaggaagacgtcaccgaactggttctgaacatc
aagaacctgtccgtgtcttccgagcacgacgagccagtcgtcgcctacctgcgcaagcag
ggcccaggcgtcgtcaccgcagcggacatcaccccgccagccggtgtggagttccacaac
cctgatctgcacatcgcgaccctaaacgccaatggcaagttcgacatggaactgaccatt
gagcgcggccgcggttacgtgtctgcctcgcagaacaagagcgctgatggcgagatcggt
cgtatccctgtggattcgatctactccccagtgctgaaggtgaccttccgcgtggaggct
acccgtgttgagcagcgcaccgacttcgatcgcttgatcgtcgacgtggagaccaaggaa
tcgatcaccccgcgcgatgcagttgcatccgcaggaaccaccctggttgaactgttcggt
ttgttccgcgaactgaacactgcagccgagggtatcgaaatcggcccatcgccaaccgac
gcagccctggctgccgacatggcactgccgattgaggatctggaactcaccgttcgttcg
tacaactgcttgaagcgtgagggcatccactctgtgggtgaacttgtcactcgctccgag
gctgacctgatggatatccgtaacttcggtgcgaagtccattgacgaagtcaaggccaag
cttgttgaactgggtctggccctgaaggattcccctccaggcttcgatctggccgctcgt
agcgccatcgatgatggcgacgactacgacgagggtctgtaa
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