Arthrobacter sp. YC-RL1: ATC04_07010
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Entry
ATC04_07010 CDS
T04187
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ary
Arthrobacter sp. YC-RL1
Pathway
ary03420
Nucleotide excision repair
ary03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ary00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ATC04_07010
03430 Mismatch repair
ATC04_07010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ary03400
]
ATC04_07010
Enzymes [BR:
ary01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATC04_07010
DNA repair and recombination proteins [BR:
ary03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATC04_07010
MMR (mismatch excision repair)
Other MMR factors
ATC04_07010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_12
AAA_30
C1_1
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
ALQ30335
UniProt:
A0A9X0FG16
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All DBs
Position
1488475..1490598
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AA seq
707 aa
AA seq
DB search
MSSYDNPPLHDLLAGLDAEQRQAAETLRGPLCILAGAGTGKTRAITHRIAHGVHSGIYNP
TSVLALTFTTRAASEMRTRLRQLGAAGVQARTFHAAALRQLQYFWPQSIGGTLPNLVEHK
APLIAEAARRLRISSDRAMVRDLAAEVEWAKVSMHSPESYAKIVESREMPNGLAPVSMAR
IFQTYEELKDDRSVIDFEDVLLLTSAILEEDEKVAASVRLQYRHFVVDEYQDVSPLQQRL
LDLWLGARDELCVVGDASQTIYSFTGARPDYLLNFGTRFPEAKVVKLVRDYRSTPEIVSL
ANKVLATRRIETAVPDRTVTWPEPLELIAQRDHGPAPEFFEATDDENEADEVAQRIKMLV
KQGQDISEIAVLYRTNGQSQAFEQALTAHSIPYVMRGAERFFSRREVKEGMLALRAALNV
SQGDDVAQLVRDVLSSHGYSANAPSGGTGAVRQRWESLSALVRLADELVEGRKAQGEKAT
LHDVVRELEERAAIQHAPTLDGVTLASFHAAKGLEWDVVFLAGLSDGLVPITYAKDQAGY
DEERRLLYVGITRARIRLYLSWSLARTPGGRAHRYPSRFLDGIKSVRQASSRQQAPVKRR
EQKVTPAVCSTCGSFLTSAKERKLKRCSSCPATYDEALFEALRAWRSQVASTNSVPAFVI
FTDATLMAISEHRPTSEQALGKISGVGRTKLERYGQAVLEVLSDHLG
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcgtacgacaaccctccactgcacgacctgctggcaggcctcgacgccgaacag
cggcaagccgccgaaaccctgcgcgggccgctgtgcatcctggctggtgccggcaccgga
aaaacccgggccatcacgcaccgcatcgcccacggcgtccattcgggcatctacaacccg
actagcgtgctggccctgaccttcaccacgcgcgccgcctcggagatgcgcacccggctg
cgccagctcggggccgccggggtccaggcacgcactttccacgccgccgcgctgcgccag
ctgcagtacttctggccccagtccatcggcggaacgctgccgaacctggtggagcacaag
gctccgctgatcgccgaggccgcgcgcaggttgcgcatctccagcgaccgggccatggtg
cgcgacctggccgccgaggttgaatgggccaaggtgtccatgcattccccggaaagctac
gccaaaatcgttgaaagccgcgaaatgcccaacggcctggccccggtaagcatggccagg
atcttccagacctacgaggaactcaaggacgaccgcagcgtcatcgacttcgaagacgtg
ctgctgctgaccagcgccatccttgaagaagacgaaaaagtcgcggcgagcgtgcgcctg
caataccgccactttgtggtcgacgagtaccaggacgtctcgccgctgcagcaacggctg
cttgacctgtggctcggcgcgcgcgacgagctgtgcgtggtcggcgatgcctcgcagacc
atctactccttcaccggagcgcgcccggactacctgctgaacttcggcacccgcttcccg
gaagccaaggtcgtcaagctcgtgcgcgactaccgttccacccctgaaatcgtgtccctg
gccaacaaggtgcttgccacccgccgcatcgagaccgcggtgcccgaccgcaccgtcacc
tggccggagccgctggaactcattgcccagcgcgaccacgggccagcccccgagttcttc
gaggccaccgacgacgagaacgaagccgacgaggtcgcccagcggatcaagatgctggtc
aagcagggccaggacatctcagagatcgcggtgctctaccgcaccaacgggcagtcgcag
gccttcgagcaggcgctgaccgcccactcgattccgtacgtcatgcgcggagccgaacgc
ttcttctcacgccgcgaggtcaaggagggaatgctcgccctgcgcgccgcgctgaacgtc
tcgcagggtgacgacgtggcacagctggtccgcgacgtgctttcctcccacggttattca
gccaacgcgcccagcggcggcaccggcgccgtgcggcagcgctgggaatccctgtcggcc
ctggtgcgcctggccgatgaactcgtcgagggccgcaaggcgcagggggagaaggcgacc
ttgcacgatgtggtccgggagctcgaagaacgggcggcgatccagcacgcaccgaccctt
gacggcgtgacgcttgcgtccttccatgccgccaagggcctggaatgggacgtggtgttc
ctggccggtctgagcgacggactggtcccgatcacctatgccaaggaccaggccggatac
gacgaagagcgccggttgctgtatgtcggcatcacccgtgcacggatccgcttgtacctg
tcctggtcgctggcccggacccccggcggccgggcccaccgctacccgtcgaggttcctg
gacggcatcaagtcggtccgccaggccagtagccggcagcaggccccggtcaagcgccgc
gagcagaaagtgaccccggcggtgtgcagcacctgcggttcattcctcaccagcgccaag
gagcgcaagctcaagcgctgctcctcgtgcccggccacctacgacgaagccctcttcgaa
gcgcttcgggcgtggcgctcgcaggtcgccagcacgaactcggttcccgccttcgtgatc
ttcaccgatgcgacgctgatggcgatctccgagcaccggccgacctccgagcaggcgctg
ggcaagatctccggcgtgggccgcaccaagctggagcgctacggccaggcagtgctggaa
gtgctctccgaccacctcggctag
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