Arthrobacter sp. YC-RL1: ATC04_07985
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Entry
ATC04_07985 CDS
T04187
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ary
Arthrobacter sp. YC-RL1
Pathway
ary03030
DNA replication
ary03410
Base excision repair
ary03420
Nucleotide excision repair
ary03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ary00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATC04_07985
03410 Base excision repair
ATC04_07985
03420 Nucleotide excision repair
ATC04_07985
03440 Homologous recombination
ATC04_07985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ary03032
]
ATC04_07985
03400 DNA repair and recombination proteins [BR:
ary03400
]
ATC04_07985
Enzymes [BR:
ary01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATC04_07985
DNA replication proteins [BR:
ary03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ATC04_07985
DNA repair and recombination proteins [BR:
ary03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ATC04_07985
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATC04_07985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ALQ32344
UniProt:
A0A9X0FIF2
LinkDB
All DBs
Position
1707309..1709921
Genome browser
AA seq
870 aa
AA seq
DB search
MAFRAFYALPAENFATSTGQHTNAVHGFVSMLLTMIRQQKPTHVAVAFDLDTPTFRVQEY
SEYKGGRNKTPEEFYGQIELIQQVMHGMNIPTVSLDPFEADDVLATLSTRGEEAGFKVLV
VSGDRDAFQLITDKTLVLYPKKGISDIPPMDADAVEAKYFVRPERYSDLAALVGESADNL
PGVPGVGPKTAAKWINQYGDLAGILEHVDEIKGKVGESLRAHVDNVTRNRRLNQLRHDLD
LPVTLDEMELVAPNREEIENLFDALEFNTLRKRLFDLFAAQEEDTAPEVAEFARVITDNA
ESLAAFLAAGEGAPVAVQPGVANGEAVGLGLFRGNEAAWVELSSLDEATETVLADFLKDA
DAPKIFHDAKVAMHLLAERGLGVDGIADDTLISAYLIQPDRRSHELVDLVQYHMKYQVPV
YQAKKGELDLGLAGELAEPTLAQAQAIFDLSAYLDTKLVEKHADKLARDMELPLIPVLFA
MERAGVAVNRARLDELRAHFTTQVDQATNEAFAAIGHEVNLSSPKQLQVVLFEELDLPRT
KKIKTGYTTDAESLQDLLVKTGHPFLVALMAYRDAIKLRQTVDGLLKSVQPDGRIHTTYA
QTVAATGRLSSLNPNLQNIPVRSEEGRRIRDVFTVGEGYDTLLTVDYSQIEMRIMAHLSE
DEGLIEAYRNGEDLHRYVGSRVFNVEPAEVTSEMRSKVKAMSYGLAYGLSSFGLSKQLKI
GVDEARKLMKDYFDRFGAVRTYLRSVVEQARKDGYTETIFGRRRYLPELNSSDRRLRDIA
ERAALNAPIQGSAADLVKVAMLKIADGLASGGYASRMLLQVHDELVLEIAPGELDAVREL
VTLEMGRAADLLVPLDVQPGVGATWHEAAH
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggccttccgcgcgttctacgcgctgcccgcggagaacttcgccacgagcaccggtcag
cacaccaacgccgtgcacggcttcgtctcgatgctgctgacgatgatccgccagcagaag
cccacccacgtcgcggtggccttcgacttggacaccccgaccttccgcgtgcaggaatac
agcgaatacaagggcggacgcaacaagacccccgaagagttctacgggcagatcgagctg
atccagcaggtcatgcacgggatgaacatccccacggtgagcctcgacccgttcgaagcc
gacgatgtcctggccaccctgtccacgcggggcgaggaagccggcttcaaggtcctggtt
gtttccggcgaccgcgacgccttccagctgatcaccgacaagaccctggttttgtacccg
aaaaagggcatcagtgacatcccgccgatggacgccgacgcggtggaagccaagtacttc
gtgcgccccgagcgctactcggatttggccgcactggtcggcgaatccgccgacaacctg
cccggcgtgcccggggtcggccccaagaccgcggccaaatggatcaaccagtacggcgac
ctggccggcatcctggagcacgtcgacgagatcaagggcaaggtcggcgaatcgctgcgc
gcccacgtggacaacgtgacccgcaaccgccgcctgaaccagctgcgccacgacctggac
ctgccggtgaccctggacgagatggagctggtggctccgaaccgcgaggagatcgagaac
ctcttcgacgcgctggaattcaacacgctgcgcaagcgcctgttcgacctgttcgccgcg
caggaggaggacaccgctccggaggtcgccgagttcgcgcgcgtgatcaccgacaacgcc
gaatcgctggcagcattcctggccgccggagaaggtgcgccggtcgcagtgcagcccggc
gtcgccaacggcgaagccgtgggcctgggcctgttccgcggcaacgaagccgcctgggtg
gagctctcctccctggacgaggccaccgaaaccgtgctagcggacttcctgaaggatgcc
gacgccccgaagatcttccacgacgcgaaggtcgccatgcacctgctggccgagcgcggg
ctgggcgtggacgggatcgccgatgacaccctgatcagtgcctacctgatccagccggac
cggcgcagccacgaactggtcgacctggtgcagtaccacatgaagtaccaggtgccggtg
taccaggcgaagaagggcgaactggatctggggctggccggagaactggccgaaccgacc
ctggcccaggcgcaggcgatcttcgacctgtcggcctacctggacaccaagctggtggag
aagcatgcggacaagctcgcccgcgacatggagctgccgctgatcccggtgctcttcgcg
atggagcgcgccggcgtggcggtgaaccgcgcccgcctcgatgagctgcgcgcccacttc
accacccaggtggaccaggcgaccaatgaggcgttcgccgcgatcggccatgaggtcaac
ctctccagccccaagcagctgcaggtggtgctcttcgaggagctggaccttccgcggacg
aagaagatcaagaccggctacaccaccgatgccgagtcgctgcaggacctgctggtcaag
accgggcacccattcctggttgcgctaatggcctaccgcgacgcgatcaagctgcgccag
accgtggacgggctgctgaagtccgtgcagccggacggccgcatccacaccacctacgcg
cagaccgtcgccgcgaccggccgcctgtccagcctgaacccgaacctgcagaacatcccg
gtgcgttcggaggaggggcggcgcatccgcgacgtcttcaccgtcggggagggctacgac
accctgctgaccgttgactactcgcagatcgaaatgcgcatcatggcgcacctctccgag
gacgagggcctgatcgaggcctaccgcaacggtgaggacctgcaccgctacgtcggctca
cgcgtgttcaacgtcgaaccggccgaggtcacttccgagatgcgctccaaggtgaaggcg
atgagctacggcctggcctacgggctgagcagcttcgggctgtccaagcagctgaagatc
ggcgtcgacgaggcccgcaagctcatgaaggactacttcgaccgcttcggcgccgtgcgc
acctacctgcgttcggtcgtcgagcaggcgcgcaaggacggctacaccgagaccatcttc
gggcgccgccgctacctgcctgagctgaacagctccgaccgccgcctgcgcgacatcgcc
gaacgcgccgcgctcaacgccccgatccagggttcggccgccgacctggtgaaggtcgcg
atgctcaagatcgccgacggcctggcctccggcggctacgcctcgcgcatgctgctgcag
gtgcacgatgaactcgtgctggaaatcgccccgggcgagctggacgcggtacgcgaattg
gtgaccctggaaatgggccgcgccgcggacctgctggtcccgctggacgtccagcccggc
gtcggcgccacctggcacgaggcggcgcactag
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