Arthrobacter sp. YC-RL1: ATC04_08550
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Entry
ATC04_08550 CDS
T04187
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ary
Arthrobacter sp. YC-RL1
Pathway
ary03030
DNA replication
ary03430
Mismatch repair
ary03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ary00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATC04_08550
03430 Mismatch repair
ATC04_08550
03440 Homologous recombination
ATC04_08550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ary03032
]
ATC04_08550
03400 DNA repair and recombination proteins [BR:
ary03400
]
ATC04_08550
Enzymes [BR:
ary01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATC04_08550
DNA replication proteins [BR:
ary03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ATC04_08550
DNA repair and recombination proteins [BR:
ary03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ATC04_08550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
PTCB-BRCT
Tic110
TerB
DEDDh_C
DUF533
Motif
Other DBs
NCBI-ProteinID:
ALQ30601
LinkDB
All DBs
Position
complement(1827881..1829116)
Genome browser
AA seq
411 aa
AA seq
DB search
MASGVFSVLDTETTGLFPGGHDRIAEIAIVRMNRDGEVLDRWETLVNPQRDLGKQSLHGI
RSRDLLGAPTFSDLAAELAWRLSGTVLVAHNLSFDARFLDAEFRRAGMPVPGHFLEHGLC
TMRMSHQYLHGAGRSLQDCCDSFGIELLEAHSAAGDAAATAVLLSRYMELDEQNPEWDLR
LGRAAQSAWIKASPGGRIIPVRRAAADAEPARHFLDRLTTRLPQFTGTEAQDDYLAILDR
ALMDRYLSAHEEQQLISLAAELGLDRAGALELHELYFQQLVRAAWADGTLTEEELLDLKT
VAGLLGLGQQSVQRALRPPADIELATAEAVPSAGKLAPGSLVVLTGDMSRARAQIEEDLR
AAGYVPHGAITKKVSLLVAADPDSLSGKAKKARDYGIPVVSEDYLWDTLLA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggccagcggagtcttctccgtcctcgacaccgagaccaccgggctgttccccggcgga
catgaccggatcgcggagatcgccatcgtgagaatgaaccgcgacggcgaagtgctggac
cgctgggaaacgctggtcaacccgcagcgggacctgggcaagcagtcgctgcatggaatc
cgcagccgtgatctgctcggtgccccgacgttcagcgacctggccgcagaactggcatgg
cggctgtcaggcaccgtgctggtggcccacaacctctccttcgatgcacggttcctggac
gcggagttccgccgggccggcatgccggtgccggggcactttctagagcatgggctgtgc
accatgcgcatgtcccatcagtacctgcacggcgccgggcgctcgctgcaggactgctgc
gattccttcggcatcgagctcctggaagcccacagcgcggccggggacgcggccgccacc
gcagtcctgctctcgcgctacatggaactcgatgagcagaatcccgaatgggatctgcgc
cttggccgggcggcgcaatcggcgtggatcaaggcgtccccgggagggcgcatcattcct
gtgcgacgggccgccgccgacgccgaaccggcccgccacttcctggaccggctgaccacc
cgcttgccccagttcaccggcaccgaagcccaggacgactacctggcgatcctcgaccgg
gcgctgatggaccggtacttgtcggcccacgaggaacagcagctgatctcgctggccgcg
gagctgggactcgaccgggccggggcgctggaactccacgagctgtatttccagcagctg
gtgcgcgcagcctgggccgacggcacgctgaccgaggaagaacttctggatctcaagacg
gtcgccggcctgctcgggcttgggcagcaaagcgtgcagagagcgctgagaccgcctgcg
gatatcgaactagccacggctgaggcggtgccatcagccggaaaactcgctcccggatct
ctggtggtgctcaccggggacatgtctcgggcccgcgcgcagatcgaggaggacctccgg
gccgctggttatgttccgcatggcgccatcaccaagaaggtgagccttctggtggccgcg
gatccggattccctgtcaggcaaggccaagaaggcccgggactacggcattccagtggtg
tcggaggactacctctgggacacgctgctcgcctga
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