Arthrobacter sp. YC-RL1: ATC04_10540
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Entry
ATC04_10540 CDS
T04187
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ary
Arthrobacter sp. YC-RL1
Pathway
ary03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ary00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ATC04_10540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ary03019
]
ATC04_10540
03009 Ribosome biogenesis [BR:
ary03009
]
ATC04_10540
03036 Chromosome and associated proteins [BR:
ary03036
]
ATC04_10540
Enzymes [BR:
ary01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ATC04_10540
Messenger RNA biogenesis [BR:
ary03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ATC04_10540
Ribosome biogenesis [BR:
ary03009
]
Eukaryotic type
90S particles
RNase
ATC04_10540
Prokaryotic type
rRNA processing factors
ATC04_10540
Chromosome and associated proteins [BR:
ary03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ATC04_10540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
ALQ30957
LinkDB
All DBs
Position
complement(2254029..2254727)
Genome browser
AA seq
232 aa
AA seq
DB search
MSSKEELMKRLGIDIDSETLRLALTHRSYSYENGGIPTNERVEFLGDSILGFSVAEYLYK
KYPDLPEGDLAKRRAAIVSTRALAIIARDLGVGEHIFLGRGEAQSNGANKASILADTMEA
LIGATYLDQGMDAARALVLRFVTPLLEDVRLLGAATDWKTVIQEEVAAKKLGDMRYQVTG
SGPDHARTYEATLVISDEPYGSGHGPSKKEAEQEAARNSWLQLHPGEQIPRS
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaaagaagaactgatgaagcgtctcggaatcgacatcgattccgagacgctt
cgtcttgccctgacccatcgttcgtattcgtacgagaacggtggaataccaaccaacgag
cgcgtcgaatttcttggcgactccatcctcggtttttcggttgccgaatacctctacaag
aagtatccggatcttcccgaaggcgacctggccaagcgccgcgccgcaattgtcagcacc
cgtgccttggccatcattgcccgggacctaggagtaggggagcacatcttcctcggacgc
ggtgaagctcaatccaacggtgccaataaggcttcaattcttgcagacaccatggaagcc
ttgatcggcgccacgtatctggatcagggaatggatgcagctcgtgcgttggtccttcgg
ttcgtgacgcctttgctggaagacgttcgccttcttggcgcggcgactgactggaaaact
gtcatccaggaagaagtcgcagccaagaaacttggtgacatgcgctatcaagtgaccgga
tccggtcctgaccatgcacgcacctatgaagcaacgcttgtaatctctgacgagccttac
ggcagcggccacggcccgtcgaagaaggaggcggagcaggaagctgctcgcaactcttgg
ctgcaactgcaccctggcgaacagattccacgaagctaa
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