KEGG   Arthrobacter sp. YC-RL1: ATC04_12730
Entry
ATC04_12730       CDS       T04187                                 
Name
(GenBank) ribonuclease
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
ary  Arthrobacter sp. YC-RL1
Pathway
ary03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ary00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ATC04_12730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ary03019]
    ATC04_12730
Messenger RNA biogenesis [BR:ary03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ATC04_12730
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: ALQ31335
LinkDB
Position
complement(2743759..2745465)
AA seq 568 aa
MTESSVGKADSARMQTPAKVKKGTMRIVPLGGLGEVGRNMTVFELDGKLLIVDCGVLFPE
EHQPGVDLILPDFSYIKDRLDDVVGLVLTHGHEDHIGAVPYLLRLREDIPLYGSKLTLAF
VEAKLAEHRIKANSNIVVEGEIAQVGNFECEFVAVNHSIPDALAVFLRTEAGTVLHTGDF
KMDQLPLDGRITDLRHFARLGEEGVDLFLPDSTNAEVPGFTVAEREIGPVLEAKFARARR
RIIVASFSSHVHRVQQVLDAAAMHGRKVAFIGRSMVRNMGIAERLGYLDIPPGVLVDLKQ
IDQLPDHKVVLMSTGSQGEPMAALSRMANGEHKVQINPGDTVILASSLIPGNENSVFRVI
NGLMRLGAEVIHKGMAKVHVSGHASAGELLYCYNILRPKNVLPVHGETRHLIANGRLAAQ
SGVPEENVLLAEDGSVIDLKDGVAKLVGQVECGYVYVDGSKVGTITDDDLKDRVTLGEEG
FISVITVINRQNGTIISGPDIHARGVAEEDSVFNEIKPKIAAAIVEAVANNPNHTTHQLQ
QITRRVIGSWVSRKLRRRPMIVPVVLEA
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgactgagagttcagtaggaaaggccgattctgcgcgcatgcagaccccggccaaggtg
aagaaggggaccatgcgcatcgtccccctcggaggcttgggcgaagtcggccgaaacatg
acagtgttcgagctcgacggcaagctgttgatcgtggactgcggcgtgctcttccccgag
gagcaccagcctggcgtggatctgatcctgccggacttctcatacatcaaggaccgcctg
gacgacgtggtgggcctcgtgctcacccacggccatgaggaccacatcggtgcggtgccg
tacctgctgcgccttcgcgaagacatcccgctgtacgggtccaagctgaccctggccttc
gtcgaagccaagctggccgagcaccgcatcaaggccaacagcaacatcgtggtggagggc
gagatcgcccaggtcggcaacttcgaatgcgaattcgtcgcggtcaaccactccatcccg
gacgccctggcggtcttcctgcgcaccgaggccggcaccgtgctgcacaccggcgacttc
aagatggatcagctgccgctggacggccgcatcaccgatctgcgccacttcgcccgcctc
ggggaggaaggcgtggacctgttcctgccggactccaccaacgcggaggtgccgggcttc
accgtcgccgaacgcgaaatcggcccggtgctcgaagccaagttcgcccgcgcccgccgc
cgcatcattgtcgcttccttctcctcgcacgtgcaccgcgtgcagcaggtgctggacgcc
gcggccatgcacggacgcaaggtggccttcatcggccgctcgatggtgcgcaacatgggc
atcgccgaacgcctgggctacctggacatcccgccgggcgtactggtcgacctgaagcag
atcgaccagctgccggaccacaaggtcgtgctgatgtccaccggctcgcagggtgagccg
atggccgcgctctcgcgcatggccaacggcgagcacaaggtgcagatcaacccgggcgac
accgtgatcctggcttccagcttgatcccgggcaacgagaactcggtcttccgcgtgatc
aacggcctgatgcgcttgggcgccgaggtcatccacaagggcatggccaaggtccacgtc
tccgggcacgcctcggccggcgagctgctgtactgctacaacatcctgcgcccgaagaac
gtgctgccggtgcacggcgaaacccgccacctgatcgccaacggccgcctggccgcgcag
tcgggtgtgccggaggagaacgtgctgctggccgaggacggctcggtcatcgacctcaag
gacggcgtggccaagctcgtcggccaggtcgaatgcggatacgtctacgttgacggctcc
aaggtcggcaccatcaccgacgacgacctgaaggaccgcgtcaccctgggcgaggagggc
ttcatctcggtcatcaccgtgatcaaccgccagaacggcaccatcatctccggcccggac
atccacgcccgcggcgtggccgaagaggactcggtcttcaacgagatcaagccgaagatc
gccgctgcgatcgtggaggcggttgcgaacaacccgaaccacaccacgcaccagctgcag
cagatcacgcgccgcgtgatcggctcgtgggtttcgcgcaagctgcgccgccgcccgatg
atcgtacctgtggtgctcgaagcctag

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