Arthrobacter sp. YC-RL1: ATC04_15230
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Entry
ATC04_15230 CDS
T04187
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ary
Arthrobacter sp. YC-RL1
Pathway
ary03420
Nucleotide excision repair
ary03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ary00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ATC04_15230
03430 Mismatch repair
ATC04_15230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ary03400
]
ATC04_15230
Enzymes [BR:
ary01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATC04_15230
DNA repair and recombination proteins [BR:
ary03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATC04_15230
MMR (mismatch excision repair)
Other MMR factors
ATC04_15230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
AAA_30
Viral_helicase1
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALQ31769
UniProt:
A0A9X0FJ73
LinkDB
All DBs
Position
complement(3315125..3317506)
Genome browser
AA seq
793 aa
AA seq
DB search
MDFLFDDFAPEPTARALPTADELLVGMNPQQEEAVRYAGGPLLIIAGAGSGKTRVLTHRI
AYLLATGRSRPHEILAITFTNKAAAEMRERAAELIGEDQAKKMWISTFHSSCVRILRREA
ATIGLKSNFSIYDSADSLRLITLVSKGLEIDPKRFTPKAIAHKISSLKNELIDDEDYAAT
INTNDPFSRAVSEVYRGYTQRLRAANALDFDDLIGQVVYMFRAFPAVADNYRRRFRHVLI
DEYQDTNHAQYSLVRELTGPDGKTPPGELTVVGDSDQSIYAFRGADIRNIIEFEKDYPNA
ATIKLEQNYRSTQNILTAANEVIKLNPDRNDKRLWTASGDGEQIVGYVGESESDEARWIA
EEILRLNDDEDVRPGDIAIFYRTNAQSRALEEQLMRVDLKYRVVGGTRFYDRKEIKDALA
YLRALVNPEDDINVRRILNEPKRGIGDRAEGAVAALAERERISFMEALRRSDEAPGLGTR
GIKMTAAFVALMDDLQIVAEGSGPAEALEAVLEQTGYLETLRSSSDPQDESRVENLAELV
AVVRDYVNDEPEGGLAGFLERVALVADADQIPEAPSDDEGAAMAAREGMVTLMTLHTAKG
LEFPVVFLTGMEHGVFPHQRSMTDEKELAEERRLAYVGLTRARERLYLTRAEQRSLWGQA
QYNPASQFLEEVPSQLIDWKREGSSFGPGLSFGSSSVNFATSRYERGSHWGAGSSVANNT
VRGHNAAPVSKQRVVQNKKIVIPKVGQSVKHTAFGLGTVVALEGAGDKTVAKVQFPDSEK
RLLLRYAPLEIVE
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctttttgatgacttcgctcctgaacccacagctcgggctttgccgaccgcg
gacgaactgctggtaggcatgaacccacagcaggaagaggccgtgcgctatgcagggggc
ccgctgctgatcatcgccggcgccggctcgggcaagacgcgtgtgctgacccatcgaatt
gcgtacctgctggcaacggggcgttcgcgcccgcatgaaatcctggccattacctttacc
aacaaggccgccgccgaaatgcgcgaacgcgccgccgagctcatcggcgaggaccaggcg
aagaagatgtggatctccacgttccactcgtcgtgcgtgcgcatcctgcgccgcgaagct
gccaccatcggcttgaagtcgaacttctcgatctacgactcggcggattcgctgcgactg
atcaccctggtttccaaggggttggagatcgacccgaagcgcttcacgcccaaggcgatc
gcgcacaagatctcctcgttgaagaacgagctgatcgacgacgaggactacgcggccacc
atcaacacgaacgaccccttctcccgggccgtctccgaggtctaccgcggctacacccag
cgcctgcgggcggcgaacgcgttggacttcgacgacttgatcggccaggtcgtctacatg
ttccgcgcgttcccggccgtggcggacaactaccgccgccgcttccgccatgtgctgatc
gacgaataccaggatacgaaccacgcccagtattcgctggttcgcgaactcaccgggccc
gacgggaagacccctccgggcgaactgacagtggtgggcgattcggaccagtccatctac
gccttccgcggcgccgacatccggaacatcatcgagttcgagaaggactacccgaacgcg
gcgacgatcaagctggagcagaactaccgttccacgcagaacatcctgaccgctgccaac
gaggtcatcaagctcaacccggaccgcaacgacaagcgcctgtggaccgccagcggcgac
ggcgagcaaatcgtcggctacgtgggggagtccgagtcggacgaagcccgctggatcgcc
gaggagatcctgcggctgaacgacgacgaagacgtacgccccggcgacatcgccatcttc
tatcgcaccaatgcccagtcgcgcgcgcttgaagagcagctgatgcgcgtcgatctgaaa
taccgggtggtcggcggaacgcgcttctacgaccgcaaggagatcaaggatgcgttggca
tacctgcgcgccctggtgaacccggaagacgacatcaacgtccggcgcatcctcaacgag
ccgaaacgcggcatcggcgaccgcgccgaaggcgccgtcgccgcgctggcggagcgcgag
cgcatctccttcatggaagcgctgcgccgctcggacgaggctccgggcctgggcacccgg
ggcatcaagatgaccgcggctttcgtggcgctcatggacgacctgcagatcgtggccgaa
ggctcgggcccggccgaagcgctggaagcagtgcttgagcagaccggatacctcgaaacc
ctgcgttcctccagcgacccgcaagacgagtcccgggttgagaacctcgcggaactggtc
gccgtcgtgcgcgactacgtcaacgacgaaccggagggcggcctggccggattcctggaa
cgggtcgcgctggtggccgacgcagaccagatcccggaagcccctagcgatgacgagggc
gcagccatggcggcacgcgagggcatggtgaccttgatgaccctgcatacggccaagggc
ctagaattcccggtcgtgttcctgaccggcatggagcacggagtcttcccgcatcagcgc
tccatgaccgatgaaaaggagctggccgaagagcgccgcctggcctacgtggggctgacc
cgcgcccgcgagcgcctctacctgacgcgtgccgagcagcgaagcctctggggacaggcg
cagtacaaccctgccagccagttcctggaagaggttccctcccagctgatcgactggaag
cgcgagggatcgtccttcggcccgggcctgtccttcggttccagctcggtgaatttcgcc
acgagccgctacgagcgcggaagccattggggagcaggttcgtcggtggcgaacaatact
gtccgcggacacaacgccgctccggtgtcgaagcagcgtgtggtgcagaacaagaagatc
gtgatccctaaggtcgggcagtcggtcaagcatacggcctttggcttgggcacagtcgtc
gccttggaaggcgctggcgacaaaaccgtggccaaggtccaatttccggattccgagaaa
cgacttctgcttcggtacgcgcccctcgaaattgtcgagtag
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