Arthrobacter sp. YC-RL1: ATC04_17090
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Entry
ATC04_17090 CDS
T04187
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ary
Arthrobacter sp. YC-RL1
Pathway
ary03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ary00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ATC04_17090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ary03400
]
ATC04_17090
Enzymes [BR:
ary01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ATC04_17090
DNA repair and recombination proteins [BR:
ary03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ATC04_17090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF8588
Motif
Other DBs
NCBI-ProteinID:
ALQ32083
LinkDB
All DBs
Position
3724844..3725644
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AA seq
266 aa
AA seq
DB search
MKIATWNVNSLRARADRVEDWLRRTDVDVLAIQETKCKDDNFPWELFENNDYEVAHCGVN
QWNGVAIASRVGLDDVQRGFAGQPEFGKGGKNPILEPRAIGATCGGVRIWSLYVPNGRAL
DDEHMGYKLSWLDALKQDTVGWLEADPQAQIALMGDWNIAPKDEDVWDINFFLENELTHV
SAPERAAFAAFEDAGFTDVVRPHTEGQFTYWDYTQLRFPKGEGMRIDFSLTSPALTARVT
GASIDREERKGKGASDHAPVIVELGG
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtgaagattgcgacttggaatgtaaattcgctgcgtgcccgagccgaccgtgttgaggac
tggctgcgccgcaccgacgtggatgtcctggccatccaggaaacgaaatgcaaggacgac
aatttcccgtgggaattgttcgagaacaacgactacgaagtcgcgcattgcggcgtgaac
cagtggaacggcgtggccattgcctcgcgcgtcggtctggatgacgtgcagcgcggtttc
gccgggcagccggaattcggcaagggcggcaagaacccgatcctagagccgcgtgccatc
ggcgcgacgtgcggcggtgtgcgcatctggagcctctacgtccccaacggccgcgccctg
gatgacgagcacatgggttacaagctcagctggctcgacgcgctcaagcaggacaccgtc
ggctggctggaagccgatccgcaggcgcagattgcgctcatgggcgactggaacatcgcc
ccgaaggacgaagatgtctgggacatcaacttcttcctggaaaacgagctgacccacgtt
tctgctcccgaacgcgcggccttcgcggccttcgaggacgccggattcaccgatgtcgtc
cgcccgcacaccgaaggccagttcacctactgggactacacccagctgcgcttccccaag
ggcgaaggcatgcgcatcgatttctcgttgacctcgccggccctcaccgcgcgggtcacc
ggcgcgagcattgatcgcgaagagcgcaaaggcaagggcgcgagcgaccatgcgccggta
attgtggagctgggcggatag
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