Arthrobacter sp. ATCC 21022: AUT26_03625
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Entry
AUT26_03625 CDS
T04477
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
arz
Arthrobacter sp. ATCC 21022
Pathway
arz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AUT26_03625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arz03019
]
AUT26_03625
03400 DNA repair and recombination proteins [BR:
arz03400
]
AUT26_03625
Enzymes [BR:
arz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AUT26_03625
Messenger RNA biogenesis [BR:
arz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AUT26_03625
DNA repair and recombination proteins [BR:
arz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AUT26_03625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Zn_ribbon_TFIIB
MFS18
HDPD
Motif
Other DBs
NCBI-ProteinID:
AMB39408
UniProt:
A0AAU7RHY7
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All DBs
Position
768923..771088
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AA seq
721 aa
AA seq
DB search
MANIPQNVALPVQSPTRQQALECLRELVGNPQAEFHDGQFEAIEALVDAGRRALVVQRTG
WGKSAVYFVSSLLLRRRGAGPTLIVSPLLALMRDQVAAAARAGVRAVAINSANALEWDTV
LAQLAADEVDVLLVSPERLTNPSFRENQLPELIRRTGLLVVDEAHCISDWGHDFRPDYRR
IADLITQLPETVPVLATTATANSRVVHDIEEQLGEGVLTIRGPLGRESLRLGVLNLPDSR
DRLGWLLTHLNDLPGSGIIYTLTVSAAEDTARLLAEAGHNVLAYTGRTDPADRERAEQLL
KDNQVKALVATSALGMGFDKPDLGFVIHLGAPSSPVAYYQQVGRAGRGAANADVLLLPGS
EDREIWQYFATASMPSAEKAQAVLNVLDEAGSALSTVALEARVDLRRTPLELLLKVLAVD
GAVERVGGGWKATGQPWAYDAERYSRIAEARVDEQESMIVYEDTSGCRMEYITSVLDDET
AAPCGRCDNCAGQWFPKDIAEAAADAAGQTLRRAGIVVEPRLQWPSGMDRLGVAVKGKIK
PDQSVAEGRVLARLTDLGWGGALRELFAAGAPDRQVDPAMLQACVQVLREWSGAEGGTAW
SGAGRPVAVVSVPSRSKPQLVDSLARGIAGIGRMPYLGALQPQHGGPVGARGGNSAYRLA
GVWERFAVGEELGQALVGAQGQPVLLVDDLIDSRWTMTVAGRCLREAGAGAVLPLALAQA
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggccaacatcccgcaaaatgtcgctcttcctgtgcagtcgcctacacgccagcaggcg
cttgaatgcctcagggagctcgtcgggaatccccaagccgagttccatgacggacaattc
gaggccatcgaagcgctggtggacgctggacgcagggccctggtggtgcagcgtaccggg
tgggggaagtccgccgtctatttcgtgtcgtccctgttgctgcgcaggcgcggggcgggg
ccaaccttgattgtttcccctttgctggcgctcatgcgggaccaggtggctgctgcggcc
cgggcaggtgtacgggccgtagccatcaactcggcaaatgcattggagtgggatacggtc
ctggcccagctggcggcggacgaggtcgatgtcctgctggtgtccccggaacgcctgacc
aatccctccttccgggagaaccagcttcccgagttgatccggcggacgggtctgctggtg
gttgatgaagcgcactgtatttcggactggggccacgatttccggccggactaccgccgc
atcgcggacctgatcacgcaattgccggaaaccgtccccgtgttggccaccacggccacg
gcgaactcgcgtgttgtccatgacatcgaggagcagctcggggaaggggtactgaccatc
cgcggccccttgggcagggaatccctgcggttgggagtgcttaacctccctgactcccgg
gaccgccttggctggttgctcacgcatctgaacgatctgcccggcagcgggattatctac
accctgaccgtttccgccgccgaggacaccgcccgcctgcttgccgaggcggggcacaac
gtcctggcttacacaggacgcaccgatcccgcggacagggagcgcgcggagcaattattg
aaggacaaccaggtcaaagcgctggtagcgacgtcagccttgggcatggggttcgacaaa
cccgatctcggcttcgtcatccacctgggcgcgccgtcgtcgcctgtcgcgtactaccag
caggtgggccgtgccggacgtggcgctgcgaatgccgacgtcctgctgcttcccggctcc
gaagaccgcgagatctggcaatacttcgccaccgcttcgatgccttcggccgagaaagcg
caggccgtcctgaacgtcctggatgaagctggttccgccctttccacggtggccttggaa
gcgagggtggacctgcgccggacgcccctggagctgctgctcaaggtgctcgccgtggat
ggagcggtggaacgggttggaggtggctggaaggcaaccgggcaaccctgggcctacgat
gctgaacgctactcccgcattgccgaggcacgcgtggacgagcaggaatcgatgatcgtc
tacgaggacacctcggggtgccgcatggagtacatcacctcagtccttgacgatgaaacc
gcggcaccttgcggccgttgtgacaactgtgccgggcagtggttcccgaaggacattgcc
gaggcagccgctgacgctgcggggcaaacgcttcgccgggcgggaattgtggtggagccg
aggctgcagtggccgtccggaatggaccggctgggtgtggcggtgaagggcaagatcaag
ccggaccagtccgtggcggaagggcgtgtcctggcccgcctgaccgacctgggctggggc
ggagcgctgcgtgaactctttgccgccggcgctccggaccgccaagtggaccctgccatg
ctccaagcctgcgttcaggtgctgcgggagtggtccggtgccgagggcgggacggcgtgg
agtggagcgggccgtccggtggccgttgtgagtgttccttccaggagcaaaccacagctg
gtggactcgctggcccggggaatcgccggcataggccgcatgccgtacttgggtgccctg
caacctcaacatggcggacccgttggagcccggggtggcaacagcgcttaccgccttgcg
ggagtatgggaacggtttgcggtgggtgaagaacttggccaggcgttggtgggcgcgcaa
ggacagcctgtgctcctggtggacgatctcatcgacagtcggtggaccatgacggtggcc
ggccggtgcctccgggaagcaggtgcgggggcggtccttcccctggcgttggcccaggct
ggatag
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