Arthrobacter sp. ATCC 21022: AUT26_12915
Help
Entry
AUT26_12915 CDS
T04477
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
arz
Arthrobacter sp. ATCC 21022
Brite
KEGG Orthology (KO) [BR:
arz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arz03019
]
AUT26_12915
Enzymes [BR:
arz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AUT26_12915
Messenger RNA biogenesis [BR:
arz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AUT26_12915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
WHD_HA2
AAA_23
nSTAND3
PhoH
Motif
Other DBs
NCBI-ProteinID:
AMB41008
LinkDB
All DBs
Position
2855949..2859932
Genome browser
AA seq
1327 aa
AA seq
DB search
MTIHISYPAELPVSERREDLMAAIAANQVTIIAGETGSGKTTQIPKMCLELGLGEQGLIG
HTQPRRLAARTVAERIASELGVEIGQEVGFQVRFTGEVSAATKVKLMTDGILLAEIQRDK
LLRKYSTIIIDEAHERSLNIDFILGYLKRILPQRPDLKVIITSATIDPERFASHFGTDTA
PAPIIEVSGRTYPVEIRYRPLSQPANPDAEESDDELEEDRDPLDAVCDAVDELAQEAPGD
ILVFFSGEREIRDAAEAINGRIQSNRRLAGTEVLPLYARLSLQEQHRVFNPGGKRRIILA
TNVAETSLTVPGIKYVIDTGTARVSRYSHRTKVQRLPIERVSQASANQRSGRCGRVSEGI
AIRLYSEEDFESRPQFTDPEILRTNLAAVILQMTAMGVARSPKDVENFPFVEPPESRAIN
DGVTLLRELGALSVAKPEGPAAPSAGKQGKNRGGRGPGRDGGGLTAIGQKLAQLPVDPRL
GRMIVEAGKRGCVREVMILAAALTIQDPRERPTDKQQLAAEKHARFRDENSDFTGYLNLW
NYVQEKQRELSSTQFRRLCRTEFINYLRVREWQDLFTQLRQLAKPLGITLDTKREADPVG
HHDDIHISLLSGLLSHIGVLDERKREYAGARGTRFAIFPGSALFKKSPAFVMAAELVETS
RLWARVAAKFDPLWAELVAPHLVKRSYSEPHWSSRQGAVLAHEKVTLYGVPIIPDRRVNY
GRIDRELSRELFIRHALVEGEWRTHHKFFHRNRALLQEVEELETRMRRRDILVDDQTLFE
FYDARVGPDVVSERHFDKWWKEARQADPALLDFDESLLMNEDAEGLDESAYPKVWRHKGF
ELPLSYEFHPVAPGSAPNPSDGVTAEVPVLFLNQMDDAPFRWQIPGQRVDLVTALIKSLP
KQIRKNFVPAPDVARQATAALEKDFDPATDELEPSLELVLRRLRGHIIPPGSWNWDAVPQ
HLRVSFKVVDSRGKVLGEGKNLAQLQETLAPATRRAIAESLGATPASTRKAKVPETPLEN
TPHGNHAGAGAAAGDGVVAERSGITEWDFGTVERQVTRTVKGHAVTGFPAVVDEGKSVAL
RVFQTRQEQEAAMRGGVIRLLALRIPSPDRYVLEHLSNTEKLTFSQNPHGSVSALIADCA
LAAIDKLTPAELPWDRTAFDALYELVRAELIDTVFTVTAVVERILSSTRRIQKQLKASTS
LPLISALNDMKSQLEQLVYPGFVAQTGYAQLSQLPRYLQAMEKRLDKLPGNVQRDALNMA
VIQGLEDDYDDAVAALTPGRRVGPELTRVRWMIEELRVSLFAVELGTAYSVSEKRIRTVL
NQALAPA
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgacaattcatatctcctaccccgctgagctgccggtatccgagcgccgcgaggatctg
atggcggccatcgccgcaaaccaggtgaccatcattgccggcgagaccggttcgggcaaa
accacccagatccccaaaatgtgccttgaactgggcttgggcgagcagggcctgatcggt
cacacacagcccaggcgcctcgcggccaggacggttgccgaacgcatcgcttccgaactc
ggcgtggagatcggccaggaagtgggcttccaggtccggttcaccggcgaggtcagtgcc
gccaccaaggtcaagctgatgaccgacggcatcctgctcgcggagatccagcgggacaag
ctgttgcgcaaatacagcacgatcatcattgacgaggcccatgaacggagcctcaacatc
gacttcattctcggctacctcaagcggatactcccccagcggccggacctgaaagtcatc
atcacctcggcaaccatcgatcccgaacgcttcgcgagccactttggcaccgacaccgcc
cccgccccgatcatcgaggtttccgggcggacgtatccggtcgaaatccgctaccgtccc
ctgtcccagccggcgaaccccgatgccgaagagtcggacgacgaactcgaagaggaccgg
gatccgctggatgcggtctgcgacgccgtggatgaactcgcccaagaggctccgggagac
atcctggtcttcttctccggcgagcgcgagatccgcgatgccgccgaggccatcaacggc
cgtatccaaagcaaccgccgccttgccgggacggaagtactgccgttgtatgcgcggttg
agcctgcaggaacagcacagggttttcaaccccggtggcaaacggcgcatcatcctggcc
acgaacgtcgccgagacatcgctgacagtccccggcatcaagtacgtcatcgacaccgga
acagcgcgagtttcccgctattcgcaccggaccaaggttcaacgcctgccgatcgaacgt
gtttcgcaggcctcggccaaccagcggtccggccgctgcgggcgagtgtccgaaggtatt
gccatccggctctactcggaagaggacttcgagtcccgtccgcagttcacggacccggag
atcctgcggaccaacctcgccgccgtcatccttcagatgaccgccatgggcgttgcccgc
agccccaaggatgtggagaacttcccgttcgtggagcctccggagtcgcgggcaatcaac
gacggcgtcaccctcctccgcgagctgggcgccctcagcgttgccaagcccgagggacct
gcggccccgtcagccggaaagcaaggcaagaaccggggcggacgcggcccgggccgtgat
ggcggcggcctgacggccatcgggcaaaagcttgcgcagctcccggtcgacccccgcctt
gggcgcatgatcgtggaggccggcaaacgtggatgcgtgcgcgaagtcatgatcctcgca
gctgccctgaccatccaggatccccgcgagcgccccaccgataagcagcagctcgcggcg
gaaaagcacgcccgcttccgtgacgagaactccgacttcaccggctacctgaatctgtgg
aactacgtgcaggaaaagcagcgggagttgtcctccacgcagttccgcaggttgtgccgc
accgagttcatcaactacctgcgggtccgggagtggcaagacctcttcacccagcttcgc
cagttggcgaaaccgttgggaatcaccctcgacaccaaacgcgaggccgatcccgtaggc
caccacgacgatatccacatcagcttgctgtcgggtctgttgagccacatcggcgtcctc
gacgagcgcaagcgcgaatacgccggggcccgcggcacccgcttcgccatcttcccggga
tcggccttgttcaagaagtcgccggctttcgtcatggcggccgaactggtggagaccagc
aggctatgggcacgcgtcgcggcgaagttcgatccgttgtgggcagagctcgttgccccg
cacctggtcaaacgctcctacagcgaaccgcactggtcatcccgccaaggcgccgttctg
gcccatgaaaaagtgaccctttacggcgtgccgatcatcccggaccgcagggtcaactac
ggccgcattgaccgcgaactctcgcgcgagctgttcatccgtcacgccttggttgaaggt
gagtggcggacccaccacaagttcttccaccggaaccgcgcactgctccaggaagtcgaa
gagctggagacccgcatgaggcggcgtgacatcctggtggatgaccagacgctctttgag
ttctacgatgcccgggtgggtccggacgttgtgtccgagcgccatttcgacaagtggtgg
aaagaggcccgccaggccgatcccgcgctgttggacttcgacgaatcgctcctcatgaac
gaggacgccgagggcctcgacgaatccgcgtatcccaaggtatggcgccacaaaggcttc
gaactgccgctgagctacgagttccaccctgtggcaccgggatcggcgcccaacccctcc
gacggcgtcaccgccgaggttccggtcctgttcctgaaccaaatggatgatgcccccttc
cgttggcagatccccggccaacgcgtggacctggtcactgccttgatcaagtcccttccc
aagcagatccgcaagaacttcgtcccggctccggatgtcgcccggcaggccactgccgcg
ttggagaaggactttgatcccgccacggacgaacttgagccatcccttgagctggttctg
cgccggctgcgtggccacatcattccgcccggttcctggaactgggatgccgtcccccag
cacctccgcgtgagcttcaaggtagtggacagcaggggcaaagtgctgggcgagggcaaa
aaccttgcccaactgcaggagaccctggcgccggcaacccggcgtgccatcgcagaatca
cttggagccacgcccgccagcacccgcaaagcgaaggtgccggagacgccgctggagaac
accccgcacggcaatcatgcaggggcaggtgcggccgccggtgacggagtagttgccgag
cgttcgggtatcaccgagtgggacttcggaaccgttgaacggcaggtcacccgcaccgtc
aaaggccacgcagtgaccggcttcccggcagtggtggacgagggaaagtcggtggccttg
cgggtgttccaaacccggcaggaacaggaagctgccatgcgtggcggcgtcatccggctc
ctggcactgcgcatcccgtccccggaccgatacgtgctggagcacctcagcaacaccgag
aagttgacgttcagccaaaacccgcatggttccgtgagtgcgctgatcgccgactgcgcc
ctggccgccattgacaagctgactcccgcggaacttccgtgggaccgaactgctttcgat
gccttgtacgaactggtccgcgcggaactgatcgataccgtcttcacggtgacggccgtc
gtcgaacgcatcctctccagtacccgcaggatccagaagcagcttaaggccagtaccagc
ctgccgttgatcagcgcgctcaacgacatgaagagccaactggagcagttggtctacccc
ggctttgtggcacagacgggctacgcccagctgagccagctgccccgctacctgcaggcc
atggagaagcggttggacaagctgcccggcaatgtgcagcgcgatgccctcaacatggca
gtcatccaaggcctcgaggacgattacgacgacgccgtggcggcattgacgcccggccgt
cgggtggggccggagttaacccgggtgcgctggatgatcgaggagctgagggtgagcctg
ttcgccgtggaattggggaccgcctactcggtctccgagaaacggatccggacggtcctg
aaccaggccctggcaccggcctag
DBGET
integrated database retrieval system
