Arthrobacter sp. ATCC 21022: AUT26_14325
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Entry
AUT26_14325 CDS
T04477
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
arz
Arthrobacter sp. ATCC 21022
Pathway
arz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AUT26_14325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arz03021
]
AUT26_14325
03400 DNA repair and recombination proteins [BR:
arz03400
]
AUT26_14325
Enzymes [BR:
arz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AUT26_14325
Transcription machinery [BR:
arz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AUT26_14325
DNA repair and recombination proteins [BR:
arz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AUT26_14325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AMB41246
LinkDB
All DBs
Position
complement(3172923..3173933)
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AA seq
336 aa
AA seq
DB search
MLIAQRPTLSEEVVAENRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTEIILNIKNLSVSSEHDEPVVAYLRKQGPGVVTAADIAPPAGVEFHN
PDLHIATLNSKGKFELELTIERGRGYVSAAQNKSGDSEIGRIPVDSIYSPVLKVTFRVEA
TRVEQRTDFDKLIVDVETKQAIAPRDAVASAGTTLVELFGLARELNTAAEGIEIGPSPTD
AALAADMALPIEDLDLTVRSYNCLKREGIHTVGELVARSEADLMDIRNFGAKSIDEVKAK
LVELGLSLKDSPPGFDLAARAAAIEEDDAAFSDDEL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgccccaccctgtccgaagaagttgtagccgagaaccgctcccgt
ttcattattgaaccgctggagccgggcttcggttacaccctcggaaactccctccgccgt
accctgctctcctccatccccggtgctgctgtaaccagcatccggatcgatggcgtgctg
cacgagttcaccacggttccgggtgtcaaggaagatgtcaccgagatcatcctgaacatc
aagaacctttcggtttcctccgagcacgatgagccggttgttgcgtacctgcgcaagcag
ggccccggagtcgtcaccgccgcggacatcgctccgccggccggcgtcgaattccacaac
ccggatctgcacattgccactctgaactcgaagggcaagttcgaactcgaactgaccatc
gagcgcggccgtggctacgtttcggcagctcagaacaagtccggcgattccgagatcggc
cgtatcccggtcgattcgatctactcgcctgtcttgaaggtaactttccgcgtggaagct
acccgtgttgagcagcgcaccgacttcgacaagctcattgtcgacgtcgagaccaagcag
gctatcgctccgcgtgacgctgttgcttctgcaggcaccaccctggtggaactgttcggt
ctggcccgtgagctgaacaccgcagctgaaggtatcgagattggcccgtcgccgactgac
gctgccctggcagctgacatggctctgccgatcgaggatctggacctcacggtccgttcc
tacaactgcctcaagcgtgagggcatccacaccgtgggtgaactcgttgcccgctccgag
gctgacctgatggacatccgtaacttcggtgcgaagtccattgacgaggtcaaggcaaag
ctcgtcgaactgggtctgtccctcaaggattcccctcccggtttcgatctcgcagcccgc
gccgcagccatcgaagaggacgacgccgcgttcagcgacgacgagctctaa
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