Aeromonas salmonicida subsp. salmonicida A449: ASA_0183
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Entry
ASA_0183 CDS
T00500
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Pathway
asa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASA_0183 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asa03019
]
ASA_0183 (recQ)
03400 DNA repair and recombination proteins [BR:
asa03400
]
ASA_0183 (recQ)
Enzymes [BR:
asa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASA_0183 (recQ)
Messenger RNA biogenesis [BR:
asa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ASA_0183 (recQ)
DNA repair and recombination proteins [BR:
asa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ASA_0183 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Cas3-like_C_2
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ABO88378
UniProt:
A4SHK6
LinkDB
All DBs
Position
192420..194243
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AA seq
607 aa
AA seq
DB search
MTVIAETLPDTPLALLQAVFGYQQFRPGQLEIIEQIVAGRDAMVLKPTGGGKSLCFQIPA
LLRPGLGVVVSPLISLMKDQVDSLRANGVAAIYINSALSREEMIQNFAAMRRGEIKLLYV
SPERLLQHEFMDRLAELPLGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALT
ATADEATRSDMLHRLELNDPFIHTASFDRPNIRYSLVEKFKAAEQLLRYVQSQKGNCGIV
YCSSRNRVEEVAERLSRHGSKAAPYHAGLPLAQRQQTQDAFLKDDIEIVVATVAFGMGID
KPNVRFVVHYDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLDNIENPQQL
QVEQYKLNVMAAFAEAQTCRRQVLLNYFGEYNDKPCGNCDICLDPPKSYDGTEDAQKALS
CVWRVGQNFGVGYVVEVLRGSLNQRIKDHGHDKLSTYGIGKDQSHEYWMSVIRQLIHKGL
LTQNITRNLVLQLTEASRPVLRGEMKLELAVPRLQPISSRKEKRNGLLDNANYDKRLFKE
LRGLRKQIAEDEEVPPYVVFNDATLVEMAQLMPMTEAEMLAINGVGHRKLERFGEAFMDL
IIDYCRR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcattgccgaaaccttgcccgatacccctcttgccctgttgcaggcggtattc
ggctaccagcaatttcggccgggccagctggagatcatcgagcagatagtggcgggacgc
gatgccatggtgctcaagcccacaggtggcggcaagtcactctgcttccagataccggcg
ttgctgagacccgggctgggcgtggtggtctctcctcttatctcgctgatgaaggatcag
gtcgacagcctgcgggccaacggtgtggcggccatctacatcaactcggccctgagccgg
gaggagatgatccagaactttgccgccatgcgtcgcggcgagatcaaactgctctacgtc
tcccccgagcgcttgttgcagcacgagttcatggatcggctggcggagctgccactcggc
ctgttcgccatcgacgaggcccattgtgtctcccagtgggggcacgattttcggccggaa
tacgcggcgctcgggcggctcaagcagtggttcccccaggtgcccgtggtggcgctcaca
gccaccgccgacgaggcgacccgcagcgatatgctgcaccggttggagctcaatgatccc
ttcatccataccgccagcttcgacaggcccaatatccgctacagcctggtggagaagttc
aaggcggcggagcagctgctgcgctacgtgcagagccagaagggcaactgcggcatcgtc
tactgctccagtcgtaatcgggtggaggaggtggccgagcgcctctcccgccacggcagc
aaggccgcgccctaccacgccggtctgcccctggcccagcgccagcagacccaggatgcc
ttcctcaaggatgacatcgagatagtggtggcaacggtggcgttcggcatggggatcgac
aagccgaacgtgcgcttcgtggtgcactacgacatccccaagaacatcgaatcctactat
caggagacgggccgggccggccgtgacggtaccccggccgaggcgctgctgctgtacgac
cccgccgacataggccgggtgcggcgcctgctcgacaacatagaaaacccgcagcagttg
caggttgagcagtacaagctcaacgtgatggcggcctttgccgaggcgcagacctgccgt
cgtcaggtgctgctcaactacttcggtgaatacaacgacaagccgtgcggcaactgcgac
atctgtctggatccgcccaagagctacgacggcaccgaagatgcccagaaggcgctctcc
tgcgtctggcgggtgggtcagaacttcggggtgggctatgtggtggaggtgctgcgcggc
tctctcaaccagcgcatcaaggatcacggccacgacaagctgtcgacctacggcatcggc
aaggatcagagccacgagtactggatgagcgtgatccgccagctgatccacaaggggctg
ctgacccagaacatcacccgcaatctggtgctgcagctgaccgaggcatcccgccccgtg
ctgcgtggcgagatgaagctggaactggcggtgccgcggctgcaacccatctccagtcgc
aaggagaagcgcaacggcctgctggacaacgccaactacgacaaacgactgttcaaggag
ctgcgcggtctgcgcaagcagatcgccgaagacgaagaggtgccgccctacgtggtgttc
aatgacgcgactctggtggagatggctcagctgatgccgatgaccgaggctgagatgctc
gccatcaatggcgtcgggcatcgcaagctggagcgcttcggcgaagcctttatggacctt
atcatcgactactgtcggcggtag
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