Aeromonas salmonicida subsp. salmonicida A449: ASA_0318
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Entry
ASA_0318 CDS
T00500
Name
(GenBank) conserved hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asa03019
]
ASA_0318
Messenger RNA biogenesis [BR:
asa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ASA_0318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
AAA_16
SHLD2_C
AAA_18
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ABO88502
UniProt:
A4SHY0
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Position
334999..335865
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AA seq
288 aa
AA seq
DB search
MQLIVVSGRSGSGKTVALRVLEDLGYYCVDNLPVNLLPQLIVSVESQYDKLAVSIDVRNL
PVSADKLETLLAQVRNEGRVEFSSFFFDAENSTLLKRYGESRRLHPLSRKQLSLDEAIRE
ETNLLAPLSSTADLRIDTTSLSIHDLSELIKTRVLGKKENELVLVFESFGFKYGIPKDAD
FVFDARFLPNPHWIPELKPFTGKDEPVARYLSSQPDVMQFILQIENMLATWLPHLERNNR
SYVTVGIGCTGGQHRSVFIAEQLAGAFRLLGKNVQIRHRTLDKSTPQH
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcaattaatagtggtaagtgggcgctccggctcgggcaagacagtggccctgcgcgtg
ctggaggatctgggttattactgtgtggataacctgccggtcaacctgctgccccagttg
atcgtgtcggtcgagagccagtatgacaagctggcggtcagtatcgacgtgcgcaacctg
ccggtgagcgcagacaagctggagaccctgctggcccaggttcgcaatgaaggccgggtg
gaattttccagcttcttcttcgatgcggagaactccaccctgctcaagcgctacggcgag
agccgccggctgcaccccttgtcccgcaagcagctctcgctggatgaggcgatccgtgaa
gagaccaatctgctggcaccgctctcctcgacagccgacttgcgtatcgacaccaccagc
ctcagcattcatgacctgagtgagctcatcaagacccgggtgcttggcaagaaagagaac
gaactggtgctggtgttcgagtcgttcggcttcaagtacggcatccccaaggacgctgac
ttcgtgttcgatgctcgcttcctgccgaatccacactggatccccgagctcaaacccttt
accggcaaggatgagcccgtggcccgctacctttccagccagccagacgtgatgcagttc
atcctgcagattgaaaacatgctggcgacctggttgccacatctggagcgcaacaatcgt
agctatgttactgtgggaattggttgcactgggggccagcacaggtccgtgttcatcgca
gagcagctggctggcgcgttccgcttgctcggcaagaacgtccagatccgccaccgcacc
ctcgacaaaagtacgccgcaacattga
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