Aeromonas salmonicida subsp. salmonicida A449: ASA_0384
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Entry
ASA_0384 CDS
T00500
Symbol
lafS
Name
(GenBank) LafS
KO
K02405
RNA polymerase sigma factor FliA
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Pathway
asa02020
Two-component system
asa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ASA_0384 (lafS)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ASA_0384 (lafS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asa03021
]
ASA_0384 (lafS)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
asa02035
]
ASA_0384 (lafS)
Transcription machinery [BR:
asa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ASA_0384 (lafS)
Bacterial motility proteins [BR:
asa02035
]
Flagellar system
Flagellar assembly proteins
Stator
ASA_0384 (lafS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Seryl_tRNA_N
UPF0122
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ABO88564
UniProt:
A4SI42
LinkDB
All DBs
Position
391444..392151
Genome browser
AA seq
235 aa
AA seq
DB search
MPIGIHRLSLPIRPLARVSRAILTRYLPLVKRAASHLRSQVSACFDQEDMEQVGMMGLLE
AWRRYDSEPDPQFESYAFKRIRGAMLDELRRLDWRPRQLRQQVHSHNQAQRELYNRLGRA
PTEQELAVSLNCTVEEVRQLAYASQAEALQSLEEWLENGGKAPATESDDVDMAMTISKVL
TSLDKREQLLLSLYYQQELNMKEIALVLGLTESRVCQLHKQCVLQLKQRLVDSIY
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgccgattgggatacaccgcctgagtttacccattcgccccctcgcacgggtgagcagg
gcaatattgactcgttatttgccgttagtgaaacgggctgccagccacctgcgcagccag
gtttctgcctgcttcgatcaggaggatatggagcaggttggcatgatggggttgctggag
gcctggcgtcgttatgatagtgaaccggacccccaatttgaaagctacgccttcaagcgt
atccgtggagccatgcttgatgagcttcggcgtctggattggcggccccgtcaactacgc
cagcaggtgcacagccacaatcaagcccagcgagaactgtataaccgtttgggacgagct
ccgactgagcaggaactggctgtatctctgaattgtaccgtggaggaagtgcgacaactg
gcatatgccagtcaagccgaagcgttacagagtctggaagagtggctggagaatggaggc
aaggcgccggccactgagtctgatgatgtcgatatggccatgaccatcagcaaggttctc
acctcattggacaagcgggagcaactgctgctctcactctattaccagcaagagttgaat
atgaaagagatcgcgctggtgttgggcctgactgaatcacgtgtctgccaattgcacaaa
cagtgcgtccttcagctcaagcagcgtttggtcgactccatatattaa
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integrated database retrieval system
