Aeromonas salmonicida subsp. salmonicida A449: ASA_0781
Help
Entry
ASA_0781 CDS
T00500
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Pathway
asa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASA_0781 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asa03019
]
ASA_0781 (pcnB)
Enzymes [BR:
asa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ASA_0781 (pcnB)
Messenger RNA biogenesis [BR:
asa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ASA_0781 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
ABO88935
UniProt:
A4SJ63
LinkDB
All DBs
Position
complement(797389..798795)
Genome browser
AA seq
468 aa
AA seq
DB search
MESPIPAHVTGQRRTLSRDQHPISRKEISENALKVLYRLNKGGYDAYLVGGGVRDILLGR
TPKDFDIATNATPEQIKALFSNCRLIGRRFRLAHIVFGRDVIEVATFRGHHHQVNTSKHV
SAQSDEGMLLRDNVYGTIEEDAERRDFTVNALYYSARDFTLHDFEGGIEDLAQRKLELIG
DPETRYREDPVRMLRAMRFAAKLDMTISPRSAAPIKELAPLLQDIPPARLFEETLKLFLA
GDGLATYKLMREYGLFQPLFPQVAALFTPHGTSPFEQFIELALIDTDTRVREDKRVTPAF
LYATLLWGCVEARARVLENESGLPWHDAFMLAINEVLDNQVRIIAVPRRFTTDVRDIWAL
QQRLTRRQGRQGRHPERAMEHPKFRAAYDFLLLRNRVERGLGELASWWERYVESNPDVRP
QLQREATRRPASGEHAQAGEPRSGDGEKRDSSSRSRRRPRRRKPKAAQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctcccatcccagcccacgtaaccgggcagcgtcgtactttaagccgtgaccag
caccccatctcgcgcaaagagatcagcgagaatgcgctcaaggtgctctatcgcctgaac
aagggtggctatgatgcctacctggtcggcggaggtgtccgggatattctgctcgggaga
acgccaaaggatttcgacattgccacaaacgcaacgccggagcagatcaaggcgctgttc
agcaactgccgcctgattggccgccgcttccgcctggcccacatcgtctttggtcgtgac
gtgatcgaagtggccaccttccggggtcaccaccatcaggtcaataccagcaagcatgtc
tcggcccagtctgatgaaggcatgctgctacgcgacaacgtctacggcaccatcgaagag
gatgccgagcgccgcgactttaccgtcaatgccctctactacagtgcccgggattttacc
ctgcacgatttcgaaggtggcatagaggatctcgcccagcgcaaactggaactgatcggc
gaccccgagacccgctatcgcgaggatccggtgcggatgctgcgcgccatgcgttttgcc
gccaagctggacatgaccatcagcccgcgcagcgccgcccctatcaaggagctggccccg
ctgctgcaggatattccacccgcccgtctgtttgaggagacgctcaagctgttcctggct
ggcgatggtctggcgacctacaagctgatgcgtgaatatgggctgttccagccgctgttc
ccgcaagtggccgccctgttcactccccacggcacctcgccgttcgagcagttcatcgag
ctggcgctgatcgataccgatacccgggtgcgggaagacaaacgggtcacccccgccttc
ctctacgccaccctgctgtggggctgtgtcgaagcccgtgcccgcgtgctggaaaacgaa
agtggcctgccctggcacgacgccttcatgctggcgatcaacgaggtgctggacaatcag
gtacgtatcatcgcagtaccacgccgcttcaccacggatgtccgcgatatctgggcactg
cagcagcgcctgacccgccgtcagggccgtcagggccgtcatcccgagcgtgccatggag
cacccgaaattccgcgccgcctacgacttcctgttgctgcgcaaccgggtcgagcgcggc
cttggcgagctcgccagctggtgggaacgttatgtggagtccaaccctgacgtacgcccg
cagctgcaacgggaagcgacccgccgccctgccagcggcgagcatgcccaagccggtgaa
ccccgcagcggtgacggcgagaaacgtgatagcagcagtcgcagccgtcgtcgcccgcgc
cgtcgcaaaccgaaagcggcgcagtga
DBGET
integrated database retrieval system
