Aeromonas salmonicida subsp. salmonicida A449: ASA_0785
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Entry
ASA_0785 CDS
T00500
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asa03016
]
ASA_0785 (ligT)
Enzymes [BR:
asa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ASA_0785 (ligT)
Transfer RNA biogenesis [BR:
asa03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ASA_0785 (ligT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ABO88939
UniProt:
A4SJ67
LinkDB
All DBs
Position
complement(801379..801906)
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AA seq
175 aa
AA seq
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MAKLFFALPLQQLAPELIDWRDQRPWPGQPVPEANLHLTLAFLGEADQVTTARLMAAAER
QHCPPLVITLDETGWFSRAKAAWVGPKAWPNELNVLARALRRHGEKLGLGNGEQGYRPHV
TLSRKAGEAPADLPAPDFVLQADHFCLYQSVTTQDGVRYEPLACWPLRAREKMAS
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacttttctttgccctgcccctgcaacagctcgcccccgagcttatcgactgg
cgtgatcagcgcccctggcccggccaacctgtgcctgaagcgaacctccacctgacgctg
gcctttctgggtgaagcggatcaggtcaccactgcccgcctgatggccgccgccgagcgt
cagcactgtccaccccttgtcatcactctcgatgaaaccggctggttcagccgcgccaag
gcggcctgggtgggccccaaagcatggcccaacgagctcaatgtactggccagggccctg
cgccgtcacggcgaaaagctggggctgggcaatggggaacagggttaccgcccccatgtg
actctatcacgcaaggcgggcgaggcacccgcagatctgccagcacctgactttgtgttg
caggcagaccacttctgcctctatcagtcggtcacgacgcaggacggggttcgctatgaa
ccgctcgcctgctggcccctgcgcgccagagagaagatggcgtcgtga
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