Aeromonas salmonicida subsp. salmonicida A449: ASA_0858
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Entry
ASA_0858 CDS
T00500
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Pathway
asa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ASA_0858 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asa03019
]
ASA_0858 (orn)
03009 Ribosome biogenesis [BR:
asa03009
]
ASA_0858 (orn)
Messenger RNA biogenesis [BR:
asa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ASA_0858 (orn)
Ribosome biogenesis [BR:
asa03009
]
Eukaryotic type
Pre-60S particles
RNases
ASA_0858 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABO89002
UniProt:
A4SJD0
LinkDB
All DBs
Position
889656..890201
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AA seq
181 aa
AA seq
DB search
MTVSAQNLVWIDMEMTGLDPEENVVLEIATIVTDKDLNVLAEGPVIAIHQSDEELAKMDD
WNVNTHTRSGLVARVKESQYDETRAVAETLDFIRQWVPERTSPLCGNSIGQDRRFMVKHM
SELEAFFHYRNVDVSTIKELVRRWQPELLDQFTKSGSHMALDDIRESIAELRFYRSHVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcagcgcgcagaacctggtatggatcgacatggagatgacgggtctggacccc
gaagagaacgtggtactggagatcgccaccatagtcaccgacaaggatctgaacgtgctg
gcagaagggcctgtcatcgccatccaccaaagcgatgaagagctggccaagatggacgac
tggaacgtcaacacccataccaggagcggactggtggcccgggtcaaggagagtcagtac
gacgaaactagggccgtggccgagaccctcgatttcattcgccagtgggtaccggagcgc
accagcccgctgtgcggcaacagcataggccaggatcgccgcttcatggtcaagcacatg
agcgagctggaagccttcttccattaccgcaacgttgacgtcagcaccatcaaggagctg
gtacgccgctggcagcccgagctgctggatcagttcaccaagagtggctcccacatggcg
ctggacgatattcgtgaatccatcgccgagttgcgcttctatcgtagtcacgtcttcaag
atctga
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integrated database retrieval system
