Aeromonas salmonicida subsp. salmonicida A449: ASA_1012
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Entry
ASA_1012 CDS
T00500
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asa03016
]
ASA_1012 (truB)
Enzymes [BR:
asa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ASA_1012 (truB)
Transfer RNA biogenesis [BR:
asa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ASA_1012 (truB)
Prokaryotic type
ASA_1012 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ABO89139
UniProt:
A4SJR7
LinkDB
All DBs
Position
1041400..1042359
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AA seq
319 aa
AA seq
DB search
MSRRRRFKGRDVHGILLLDKPTGLTSNDVLQKVKRIYNAAKAGHTGALDPLATGMLPICL
GEATKFSQYLLEADKRYEVTAKLGERTNTSDSDGEVVSTRPVNVALGTLIESLDQFRGPI
MQVPSMYSALKHNGRPLYEYAREGIEIEREARPITVFELKLISFEGDEVKLEVHCSKGTY
IRSLVDDLGEVLGCGAHVTQLRRTQVATYPYERMLTLEQLECIFEQAKAESIPPREQLDP
LLLPMDTAVAALPEVNMLAAVAAYVNQGQAVQVAGAPQSGQVRMTVGPEREFIGVGEIDD
EGRVAPKRLVRYHDEHDEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtagacgccgtttcaagggtcgtgacgtacacggcatcctgctgctggacaag
ccgaccggtctgacctccaacgatgtgttgcagaaggtcaagcgtatctacaacgcagcc
aaggccggtcacaccggcgctctggatccgctggcgaccggtatgctgccgatctgcctc
ggcgaggccaccaagttctcccagtatctgctggaggcggacaagcgctatgaggtgacc
gccaagctgggcgagcgcaccaacaccagcgactccgacggcgaggtggtctccacacgt
ccggtgaacgtggccctgggtaccctgatcgagtcgctggaccagttccgcggccccatc
atgcaggtgccgtccatgtactctgccctcaagcacaacggtcgcccgctctacgaatat
gcccgtgaaggcatagagatcgagcgggaagcccgccccatcactgtgttcgagctcaag
ctcatcagctttgaaggggatgaggtcaagctggaagtgcactgcagcaaaggcacctac
attcgctccctggtggacgacctgggtgaagtgctgggctgtggcgcacacgttacccag
ctgcgccgtacccaggtggccacgtatccctatgagcggatgctgactctggaacagctc
gagtgcatcttcgaacaggccaaggccgagagtatcccgccacgggagcagctcgacccc
ttgttgctgccgatggataccgccgtggccgcactgcccgaggtgaacatgctggcggca
gtcgccgcctatgtgaaccagggtcaagccgtgcaggtagctggcgcgccgcaaagcggc
caggttcgcatgacggtgggcccggagcgtgagttcatcggtgtgggcgagatcgacgat
gaagggcgggttgcccccaagcgtctggttcgctaccacgatgaacacgacgaggagtga
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