Aeromonas salmonicida subsp. salmonicida A449: ASA_1108
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Entry
ASA_1108 CDS
T00500
Name
(GenBank) small-conductance mechanosensitive ion channel (MscS) family protein
KO
K22051
miniconductance mechanosensitive channel
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asa02000
]
ASA_1108
Transporters [BR:
asa02000
]
Other transporters
Pores ion channels [TC:
1
]
ASA_1108
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
ABO89230
UniProt:
A4SK08
LinkDB
All DBs
Position
complement(1139914..1143189)
Genome browser
AA seq
1091 aa
AA seq
DB search
MLQRLLSLLLLSLSLFPVLVQADDAITQVEELLQSVPKTDTPENQKLRESYQQALQFARE
AQRYREQGKAYQQILIDYPKESARLKESLHNYQPQSRPSLSSLKEEALRQAIGLSSNRQL
NLRKERQAVMDSLNQLESTGQEYHLRVDELRKQLQQTRTLLDRLSFSSESDRQQDAQRLA
TRLKEQSLADRIQMLELEQLSAQQRNDLGKLKLQELNLAITDEDEWQASLLNQQNQLRRD
KTEQALAESERLRKQLTSDMPLLLEQQNQALSIQLGALEDQIERVQDDQRAIDKNLSALN
DLVNSVREQLEWLQISNAYGENLRSKLSDLPAYFPLDKLESAIVNARMAKYQYETEQDAL
KDPRQMREQLMATDEVALDRSQQAVLDNLLKARRQLLTRLNDASDSLIQEQTRLKLLYSR
QNSKIDEIRDLSASHLFWMPDVRPLTPTVLLGIPAALGLAFNPTNWLQLPQAIAENNPIT
LTLAGIGILVLAWCWFKLARHLTHYSQHIAPRIGKVTQDKFSLTSRLLVRSLLASLPLPA
MVLMVHGLLDGAWQYPFAVAVARGLSEIWFLLLALLMARHLTLEKGILILHFRWQKEWVQ
KVWSQFRTLLLVIIPSFFVQGMANSYQEHAFYDSLGRMAFIVGALWLLLFFARLNRERLP
LTWGQADMSKPHLLHHFIWNSLMLAPLLAVIGSLLGYFYTSRILLRQLELSLLMGLGCLL
IYYLAHRWMLIQRRRLAFDRAKSKRAEILAQRGREEGHDELSSEIPDVVEDTELDLDTIS
AQSLGLVRTLLMLGFTMLVVVQWSELNSAFSFLRSIEVWQVTSKIGGIEQLSPITLQDLM
LTAFTFILTVVTARNLPGLMELTLLQHLSLSPGTGFAITTVTKYIVLVVGALSGFSILGI
DWSKAQWMVAALSVGLGFGLQEIFANFVSGLIILFEKPIRLGDTVTIRELTGTVTKIKTR
ATTIVDWDRKEIIVPNKAFITEQFINWSLSDAITRVRLRIRIGLTQDPKRIQTILEDSIK
ASTLVLETPSPEVFLIEFTDSALIYEMRLYVNSMDHRMPITHEVHSLVLEKLQQQGLGLP
HQQIDIRLSRA
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaacgcctgctctctctgctgctgctctccctctctctctttcccgtgctcgtc
caggccgatgacgccatcacccaggtagaggagttgctgcagagcgtccccaagacggac
accccggaaaaccagaaattgcgggagagttatcaacaggcgctgcagtttgcccgggaa
gcccagcgctatcgtgagcagggcaaggcttatcagcagatcctgattgattaccccaag
gagtcggcccgcctcaaggagagcctgcacaactaccagccccagtcccgcccgtccctc
tcctccctgaaggaggaggcgctgcgccaggccatcggcctgagcagcaaccgtcaactc
aacctgcgcaaggagcgtcaggcggtgatggacagcctcaaccagttggagagcacgggc
caggagtaccacctgagggtcgacgagctgcgcaagcagttgcagcagacccgtaccctg
ctcgaccggctcagcttcagcagcgagtcggatcgccagcaggatgcccagcggctggcc
acccgcctcaaggagcagagtctcgccgaccggatccagatgctggagctggagcagctc
tccgcccagcagcgcaacgatctcggcaagctgaagttgcaggagctcaatctggccatc
acggatgaagacgagtggcaagccagcctgctcaaccagcagaaccagctgcgtcgcgac
aagacggagcaggcgctggccgaaagcgagcggctgcgcaaacaactcacctccgacatg
ccgctgctgctggagcagcagaaccaggcgctctccatccagctcggcgcgttggaggat
cagatagagcgggtacaggacgatcaaagggctatcgacaagaacctgtcggccctgaac
gatctggtcaattcggtgcgggagcaattggaatggctgcagatcagcaacgcctacggc
gagaatctgcgcagcaagctctccgacctgcccgcctacttcccgctcgacaagctggag
tccgccatcgtcaacgcccgcatggccaaataccagtacgaaaccgaacaggatgccctc
aaggatccgcgccagatgcgcgagcagctgatggccaccgacgaggtggcgctcgatcgc
tcccagcaggcggtgctcgacaatctgcttaaagccagacggcaactgttgacccgcctc
aacgacgcgtccgacagcctgatccaggaacagacccgcctcaagctgctctacagccgc
cagaacagcaagatcgacgagatccgcgacctcagcgccagccacctgttctggatgccg
gatgtgcgtccgctcaccccgaccgtgctgctcggcattccggcggccctaggccttgcc
ttcaacccgaccaactggctgcaactgccgcaagccatcgccgagaacaatcccatcacc
ctcactctggccggtattggcatactggtgctggcctggtgctggttcaagctcgcccgt
cacctgacgcattacagtcagcacatagcaccgcgcatcggcaaggtgacccaggacaag
ttcagcctcaccagccgcctgctggtgcgctctttgcttgcctccctgcccctgcccgcc
atggtgctgatggtgcatggtctgctcgacggcgcctggcaatacccgttcgctgtggcg
gtcgcccggggcctgagtgaaatctggttcctgctgctggcactcttgatggcgcgccac
ctgacgctggaaaaagggatactgatcctgcattttcgctggcagaaagagtgggtacag
aaggtgtggagccagtttcgcactctgctgctggtgatcatccccagcttcttcgtgcag
ggcatggccaacagctatcaggaacacgctttctatgactccctcggcaggatggcgttc
atcgttggcgccctctggttgctgctcttctttgcccgcctcaaccgggagcgactgccg
ctgacctggggtcaggccgacatgagcaagccccacctgctgcaccacttcatctggaac
agcctgatgctggcccccctgctggcggtgatcggctccctgctcggctacttctacacg
tcccgcatcctgctgcgccagctggagctcagcctgctgatggggctcggctgcctgctc
atctactatctggcccatcgctggatgctgatccagcgccgccgcctcgccttcgatcgg
gccaagagcaaacgggccgagatactggcccaacgcggccgggaagagggccatgatgaa
ctcagctccgagataccggatgtagtggaagataccgagctggatttggacaccatcagc
gcccagtcgctgggactggtgcgtaccctgctgatgctgggattcaccatgctggtggtg
gtgcagtggtccgagctcaactcggcgttcagtttcctgcgcagcatcgaagtgtggcag
gtcaccagcaagattggcggcatagagcagctctcccccatcacactgcaggatctgatg
ctgacggcattcaccttcatactgacggtggtcactgcccgcaatctgccgggcctgatg
gagctgaccctgctccagcacctgagcctgtccccgggcacagggtttgccatcaccact
gtcaccaagtacatagtgctggtagtgggggcgctcagcggcttctccattcttggtatc
gactggtccaaggcgcagtggatggtggcagccctctcggtcggcctgggtttcggcctg
caggagatcttcgccaacttcgtctccggcctcatcatactgttcgagaagccgatccgg
ctcggcgacactgtcaccatccgcgagctgaccggcacagtgaccaagatcaaaacccgc
gccaccaccatagtggactgggatcgcaaggagatcattgttcccaacaaggccttcatc
acggagcaattcatcaactggtctctgtcggacgccatcacccgggttcgcttgcgtatc
cgcatcggcctgactcaggatcccaaacggatacagacgattctggaagattcgatcaag
gcctccactctggtgctggagaccccctcccccgaggtgttcctgatcgaattcaccgat
tcggcgctgatctacgaaatgcggctctatgtgaacagcatggatcaccgcatgcccatc
acccacgaagtacactcgctggtgctggagaaactgcagcaacaaggtctggggctgccg
caccagcagatcgatattcgactgagccgcgcctga
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