Aeromonas salmonicida subsp. salmonicida A449: ASA_1863
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Entry
ASA_1863 CDS
T00500
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Pathway
asa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ASA_1863 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asa03400
]
ASA_1863 (xseA)
Enzymes [BR:
asa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ASA_1863 (xseA)
DNA repair and recombination proteins [BR:
asa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ASA_1863 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABO89939
UniProt:
A4SM17
LinkDB
All DBs
Position
complement(1965882..1967252)
Genome browser
AA seq
456 aa
AA seq
DB search
MNRYTPSSAANGREQQVFTVTRLNSAVRMILEQDLGLVWLTGELSNLAMPSSGHWYFSLK
DLGAQVRCAMFKGNNRRVAFRPQDGMQVLVQARVSLYEPRGDYQLIIESMQPAGDGVLAL
RFEELKRRLGAEGLFDEGRKRPLPREPRAVGLVTSATGAALHDMLTVLKRRAPDLPVFIY
PTQVQGSAAIGQIVAAIALANRRAEVDVLIVGRGGGSLEDLWCFNEEVVARAIANSAIPV
ISAVGHEVDVTISDFAADLRAPTPSAAAELVAPDQSARAQRLAHLWQRLVQAMNRHQTAA
RHGFVLLQKRLDHQDPKRRLEQQSQRLDELSARLQQLLNQRLHQGERRLANLELRLQAKS
PERLLAIGRRRHQLAQERLYALITKRQDQASHRLAMLTARLDGVSPLATLGRGYSITRTQ
SGDVINRAAQVNAGQTLVTTLAEGHLQVRVEEVHNR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccgatataccccatccagtgcggcgaacggccgcgagcagcaggtctttaccgtc
acccgcctcaacagcgccgtacgcatgatcctggagcaggatctggggctggtgtggctg
acgggggagctctccaatctggcgatgccaagctcgggccactggtacttctcgctaaaa
gatctgggcgcccaggtgcgctgcgccatgttcaagggcaacaaccggcgggtggcgttt
cgtccgcaggatggcatgcaggtgctggtgcaggcccgagtctccctctatgagccccgc
ggcgactatcagctgatcatcgagtcgatgcaacccgctggcgacggcgtgctggccctg
cgctttgaagagctcaagcgccggctaggggcagaaggattgtttgacgagggccgcaaa
cggccgctacctcgcgaaccgcgcgccgtggggctggttacctccgccaccggcgccgcc
ctgcacgacatgctgaccgtgctcaagcgccgcgcgccggatctccccgtcttcatctac
ccgacccaggtgcagggcagcgcggccatcggccagatagtggcggccattgccctggcc
aaccgccgcgccgaggtggatgtgctgatcgtcggtcgcggcggcggctcccttgaagat
ctctggtgcttcaacgaagaggtggtagcgcgtgccatcgccaactctgccattccggtg
atcagcgctgtgggccacgaggtggatgtcaccatcagcgactttgccgctgatcttcgc
gcccccacaccatcggctgccgccgaactggtggcaccggatcaaagcgctcgcgcccag
cgcctcgcccacctctggcagcgactggtgcaggcgatgaatcgccaccaaaccgccgcc
cgccacggctttgtgctgctgcaaaagcggctcgaccatcaggatcccaaacgccgactg
gagcagcaatcccaacgtctcgacgagctctccgcccgcttgcagcaactgctgaaccag
cggctgcatcagggggagcggcgcctcgccaacctcgaacttcgcctgcaggccaaaagc
ccggagcggctgctggcaatcggtcgtcgtcgccaccaactggcgcaagagcggctgtat
gcattgatcaccaagcgccaggatcaggccagccatcgcctcgccatgctgactgcccgc
ctcgacggcgtaagcccgctcgccaccctggggcgcggttactccatcactcgcacccag
agcggcgacgtgatcaaccgcgccgctcaggtgaacgccgggcaaaccctggtcaccacg
ctggcggaagggcacttgcaggtacgggtagaagaagtgcacaaccgatga
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