Aeromonas salmonicida subsp. salmonicida A449: ASA_1892
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Entry
ASA_1892 CDS
T00500
Symbol
hupB
Name
(GenBank) Bacterial nucleoid DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asa03032
]
ASA_1892 (hupB)
03036 Chromosome and associated proteins [BR:
asa03036
]
ASA_1892 (hupB)
03400 DNA repair and recombination proteins [BR:
asa03400
]
ASA_1892 (hupB)
DNA replication proteins [BR:
asa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ASA_1892 (hupB)
Chromosome and associated proteins [BR:
asa03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ASA_1892 (hupB)
DNA repair and recombination proteins [BR:
asa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ASA_1892 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ABO89967
UniProt:
A4SM45
LinkDB
All DBs
Position
2006231..2006503
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AA seq
90 aa
AA seq
DB search
MNKSQLIDKIADGADISKAAAGRALDAFIDAVGEALKEGDQVALVGFGTFAVRERAARSG
RNPQTGATIEIAAGKVPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaactgattgacaagattgcagacggtgctgatatctccaaagccgct
gctggccgtgcgctggacgctttcattgatgccgtgggtgaagccctgaaagagggtgac
caggttgctctggtgggtttcggtactttcgccgtgcgcgagcgtgctgcccgttctggt
cgtaacccgcaaactggcgcgaccatcgaaatcgccgctggtaaagttcctgctttcaaa
gccggcaaggccctgaaagacgctgtcaactaa
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