Aeromonas salmonicida subsp. salmonicida A449: ASA_2094
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Entry
ASA_2094 CDS
T00500
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asa03016
]
ASA_2094 (rnd)
Enzymes [BR:
asa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ASA_2094 (rnd)
Transfer RNA biogenesis [BR:
asa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ASA_2094 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
ABO90160
UniProt:
A4SMN8
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All DBs
Position
complement(2226133..2227272)
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AA seq
379 aa
AA seq
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MALINAQATMHYQLITQQAELEQYLASLADVPLAIDTEFVRTRTYYPQLGLFQIYDGEHL
ALLDPLTLDLAPLWQRLGRAGQIAILHASGEDLELIQHEAGHLPNQMHDTQLATAFLGYG
VSVGFGALAKEFLGVDLVKDQARTDWLARPLTERQLEYAAADVLYLMPLYEKVMAKLHES
GKFAWFEQECQNHSARKTQGSDPYQAYLDIINAWQLGRRELAILRELAAWRQQEAVRRDL
ALNFVVKELHLFKVAERRPASLRDLNELGLAPIEIKIHGKRMLDIVAQAQRSEPDSWPEP
IRRLVDYPQYKAELKRIKGMVEEKAKACNIPPELVASKKIIHQYFTWSWRMSDEERARSD
KPMLLQGWRHELVGHLLAQ
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
ttggccctgatcaacgcgcaggcaacgatgcactatcaacttatcactcagcaagccgaa
ctggagcagtatctcgcctccctggccgatgttcccctggccatcgatactgaattcgtt
cgcacccgcacctattacccccagctgggtctgttccagatctatgatggtgagcatctg
gcgttgctggatccactcaccctggatctcgcccccctttggcaacggctcggtcgggca
gggcagatcgccatactgcacgcttccggcgaagaccttgagcttatccagcatgaagct
ggtcacctgcccaatcagatgcacgacacccagctggcaacggccttcctgggctatggt
gtctctgtgggttttggtgcgctggccaaggagtttctcggggtggatctggtcaaggat
caggcgcgtaccgactggctcgcccgcccgctcaccgaacgtcaactcgaatacgcagcc
gccgatgtgctctacctgatgcccctctacgagaaggtgatggccaaactgcacgaaagc
ggcaaatttgcctggttcgagcaggagtgccagaaccactcggctcgcaagactcagggt
agcgatccctatcaagcctatctcgacattatcaacgcctggcaactggggcgccgcgaa
ctggccatactgcgcgagctggctgcctggcgccagcaggaagcggtgcgccgggatctg
gctctcaactttgtggtcaaggagctgcacctgttcaaggtggctgagcgtcgtccggcc
tccctgcgcgacctcaacgaattgggtctggcccccatcgaaatcaagatccatggcaag
cggatgctggacatagttgcccaggcccagcgcagcgagccggatagctggcccgagccg
atccgccgactggtggattatccccagtacaaggctgaactcaagcgcatcaaggggatg
gtggaagagaaggccaaggcctgcaatattccgcctgaactggtggcgagcaagaagatc
attcaccagtacttcacctggagctggcgcatgagcgatgaagagcgcgcccgaagcgac
aagcccatgttgctgcaagggtggcgtcatgagctggtgggtcatttgctggcccaataa
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