Aeromonas salmonicida subsp. salmonicida A449: ASA_2460
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Entry
ASA_2460 CDS
T00500
Name
(GenBank) type VI secretion system sigma-54 dependent transcriptional regulator
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asa03000
]
ASA_2460
Transcription factors [BR:
asa03000
]
Prokaryotic type
Helix-turn-helix
Other families
ASA_2460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA_2
HTH_8
AAA_16
AAA
bpMoxR
AAA_3
Torsin
UBM
Motif
Other DBs
NCBI-ProteinID:
ABO90499
UniProt:
A4SNM7
LinkDB
All DBs
Position
complement(2622667..2624205)
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AA seq
512 aa
AA seq
DB search
MEQALAFALALTQQRDEQHLCHWWSSTLNASFQPKGILLGMLDVSGRQLECSGWVKGQAV
SLALAVDDFSHPLAYVLHKAQSRTWDSLHGGARIEHAAFRTLLANLGQQCGLHAFPLNDG
NGKPFAVLAMMDSGEVLQEWAARPELAQLSQVFCNQLTLIRDLGLSRRDQSVLRDSLRQM
KGEGERQRQYEKLLGDQLIGQSAVIRGLREQISLAGRHKLTVLIQGETGSGKEVVARLVH
QCSDRAAKPFVAINCAAIPENLIESELFGYQKGAFSGALSNKTGLVAQANGGTLFLDEVG
DMPAAMQAKLLRVLETRSYRPLGAEQECHSDFRLIAATHQPLTRHVEEGQFRADLYHRLC
QCLLLIAPLREHMDDIPLLCQHFMAQFAAQDGKTLAGLQRKFLKQLQSYDFPGNVRELRN
LLEVACAHTRQGEEVVLEALPPELRERVCVELPGSMDDYNHIRDLRRAMQQYEASVIEAR
LRYFQGNRMLVAESLNIPKRTLDHKCQKLEVN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagccctcgcatttgcccttgccttgacccagcagcgcgatgagcagcacctg
tgtcattggtggagctcgaccctcaatgccagctttcagcccaaggggatactgctgggc
atgctggatgtgagcggccgtcagctcgaatgcagcggctgggtcaaggggcaggcggtg
tcgctggcgctggcggtggatgacttttcccatccgctcgcctatgtgctgcacaaggcc
cagtcccgtacttgggactccctgcacggcggcgcccgcatcgaacacgccgcgtttcgc
accctgctggccaatctgggccagcagtgcggcctgcatgcctttcccctcaatgatggc
aacggcaagccgttcgccgtgctggccatgatggacagcggtgaggtgctgcaagagtgg
gcggcccgccctgagcttgcccagttgtcacaggtgttctgcaaccagctcacccttatc
cgtgatctggggcttagccgccgggatcagagcgtgctgcgcgactccttgcgccagatg
aagggggagggagagcgccagcgccagtatgagaagctgctgggcgatcaattgatcggc
cagtcggcggtgatccgcgggctgcgcgagcagataagcctggcgggccggcacaagctg
accgtgctcattcagggggagaccggcagcggcaaggaggtggtcgcccggctggtgcac
cagtgctcggatcgcgccgccaagccgttcgtggccatcaactgcgccgccattccggag
aacctcatcgagagcgagctgttcggttaccagaagggggccttctccggcgcgctgtct
aacaagacagggctggtggcccaggccaacggcggcaccctgtttctggatgaagtgggc
gacatgcccgccgccatgcaggccaagctgctgcgggtgcttgagactcgcagttaccgg
ccgctcggggccgagcaggagtgccactccgattttcgcctcatcgccgcgacccatcag
ccgctcacccgccatgtggaggaggggcagttccgggccgatctctatcaccgcctctgc
cagtgtctgctgctcatcgcccccctgcgggaacacatggatgacatccccctgctgtgc
cagcacttcatggcccagtttgccgcccaggatggcaagaccctggcggggctgcagcgc
aagttcttgaagcaactgcaaagttatgactttcccggcaatgtgcgcgagctgcgtaat
ctgctggaggtcgcctgtgcccacacccgtcagggggaagaggtggtactggaagcgctg
ccccccgagctgcgcgagcgggtctgcgtcgagttgcccggttccatggatgattacaac
cacattcgggatctgcgccgggccatgcagcagtacgaggcttccgtcatcgaggcgcgt
ctgcgctacttccagggcaatcgcatgctggtggccgagagtctgaatattcccaagcgc
accctggatcacaagtgccagaaactggaggtgaactga
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