Aeromonas salmonicida subsp. salmonicida A449: ASA_3068
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Entry
ASA_3068 CDS
T00500
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asa03400
]
ASA_3068 (sbcD)
DNA repair and recombination proteins [BR:
asa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ASA_3068 (sbcD)
Archaeal homologous recombinant proteins
ASA_3068 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
ABO91067
UniProt:
A4SQ95
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All DBs
Position
complement(3304927..3306153)
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AA seq
408 aa
AA seq
DB search
MKILHTADWHLGHQLHGHERRFEHDSFLDWLTDTIKQRQIDALLVAGDLFDTANPPASAW
QQIYRFLARLRAEMPHLNMVLIGGNHDSPSKLDAPHELLRAFDLHLVGSISRDSEGKLET
DRLLVPLQDREGKIAAWCAAVPFLRSSDLRVEQLEEGQDRLIEGVRRVYEEVLTQGRARC
EPDQALIAMGHAYLAAGQLSELSERRVLGGNQHALPANIFASADYTALGHLHLAQSPAEG
VHYSGSPLPLSLAEANYNHQVLEVTFEGGKLMGLERIPVPRAVEMIRLPESELEGALKAI
EALSLPALPSEAQPFLEVRLLLPRPEARIRERILAALAGKPVRLARISTRYLGSGQGLAD
GQNQRRLDELSPTEVFRLCYQRQFDGEPEAELVASFEEILQQVKESGA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgcataccgccgactggcaccttggtcatcaactccatggccatgaacgc
cgcttcgaacacgacagcttcctcgactggttgaccgataccatcaagcagcggcagatc
gatgctctgctggtggcgggcgatctgtttgataccgccaatccccccgccagcgcctgg
cagcagatctaccgttttctggccaggctgcgggccgagatgccccacctcaacatggtg
ctgatcggcggcaaccacgactctccctccaagctggatgcccctcacgaactgctgcgg
gcctttgatctgcatctggtgggcagcatcagccgtgacagtgagggcaagcttgagacc
gaccgcctgctggtgccgctgcaagacagggagggcaagatagccgcctggtgcgccgcc
gttcccttcctgcgcagcagcgacctgagggttgaacagcttgaagagggtcaggatcgg
ctgattgaaggggtacggcgggtctatgaagaggtattgacgcaaggtcgtgcacgctgc
gaacccgatcaggcactgatcgccatgggccacgcctatctggcggcaggccagctctcc
gagctctcagagcggcgggtactcggcggcaaccagcatgccctgcctgccaatattttt
gccagcgccgactacacggcgctcggtcacctccatctggcccagagcccggccgagggt
gttcactacagcggctcgccactgccgctctcgctggccgaggccaactacaaccatcag
gtgctggaagtgacgtttgaggggggcaaattgatggggctggagcggatccctgtgccc
cgcgcggtggagatgatccgcctgcccgagagcgaactggaaggggcgctcaaggccata
gaggccttgtccctgccggcgctgcccagcgaggcacagcccttcctcgaagtacgactg
ctgctgcccagacccgaggcccgcatccgcgagcgcatcttggcggcgctagcgggcaag
ccggtacgcctggcccgtatcagtacccgctatctgggctctggccaggggctggccgat
ggccagaaccagcgcaggctggatgagctttcccccactgaggtgtttcgcctctgctat
cagcgccagtttgacggtgaacccgaggccgaactggtcgcctcgtttgaagagatattg
caacaggtgaaggagtccggcgcatga
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