Aeromonas salmonicida subsp. salmonicida A449: ASA_3145
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Entry
ASA_3145 CDS
T00500
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Pathway
asa03030
DNA replication
asa03430
Mismatch repair
asa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASA_3145 (dnaE)
03430 Mismatch repair
ASA_3145 (dnaE)
03440 Homologous recombination
ASA_3145 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asa03032
]
ASA_3145 (dnaE)
03400 DNA repair and recombination proteins [BR:
asa03400
]
ASA_3145 (dnaE)
Enzymes [BR:
asa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ASA_3145 (dnaE)
DNA replication proteins [BR:
asa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ASA_3145 (dnaE)
DNA repair and recombination proteins [BR:
asa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ASA_3145 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ABO91139
UniProt:
A4SQG7
LinkDB
All DBs
Position
complement(3404560..3408045)
Genome browser
AA seq
1161 aa
AA seq
DB search
MTMAEPRFIHLRVHSDFSMVDGLQKINPIVGAAAANNMPALALTDQMNMCGLVRFYGAAH
GKGIKPIVGADFWVQSSELGDEQFRLTLLAMDNDGYQNITLLISRGYQRGHVQGRPVIDK
EWLTDHAKGVIVLSGGREGDVGKFLLKGNRQMTESCLAFYQTHFPDAYYLELLRTGRPDE
EVYLHMAVAIATEFELPVVATNEVVFLNAEDFDAHEIRVAIHDGYTLMDKRRPRRYSPQQ
YLRSQEEMAELFADIPEALENTVEIAKRCNVTVRLGEYFLPNFPTGDMTTEDFLVAKSKE
GLEERLAFLFPDPAVRAVKRGEYDERLEIELKVINQMGFPGYFLIVMEFIQWSKDNGIPV
GPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIEHV
SDMYGRDAVSQIITFGSMAAKAVVRDVGRVLGHAYGFVDRISKLIPPDPGMTLAKAFEAE
LKLPELYEQDEEVKDLIDMARRLEGVVRNAGKHAGGVVIAPTKITDFAPLYCDDSGNHPV
TQFDKNDVEYAGLVKFDFLGLRTLTIIDWALGMINPRLAKEGKPPVDIAAIPIHDKKSFD
LLQRFETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIERKHGK
EAISYPDEKWQHESLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKNPA
EMAKQRSGFEEGAVKNGIDGELAVKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHF
PAEFMAAVMTADMDNTDKIVTLVDECQRMGLTVIPPDVNTGRYRFSVNEDGHIVYGIGAV
KGVGEGPIDAILSARDQDGPFRDLFDFCNRVDIKKINKRVMEKLILSGAMDRLGPHRAAL
MATLEEAMRAAEQHAKAQAVGQVDMFGVLTQEIDDVKKAFANVPHWPDKVWLEGERETLG
LYLTGHPINQYSGELRRYTSGRLCDLHPTSRDTVTTAAGLVIAARSMVTKRGNKMGIFTL
DDRSGRLDVTLFSEALEKYEELMQKDRILVVSGQVSFDDFSGGLKMSARELLDINDARER
FARAIRISLDEQRIDDRFFPRLCEILEPARAGVCPVQVNYRRPGSRVRLTLGTEWRVTPT
DQLIDDLRVLLGRERVELVFD
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggctgaaccccgttttatccacctgcgcgtccactccgatttctccatggtc
gatggtctgcagaagatcaatcccatcgtcggagccgcggcagccaacaacatgccggcg
ctggccctgaccgaccagatgaacatgtgcggtctggtgcgcttctatggcgccgcccac
ggcaagggcatcaagcccatcgtcggggccgacttctgggtgcaaagcagtgagctgggg
gacgagcaattccgcctcaccctgctggccatggacaacgatggctaccagaacattacc
ctgctcatctcccgcggttatcagcgtggccatgtgcagggacgtcccgtcatcgacaag
gagtggctcaccgatcacgccaagggggtcatagtgctctcgggtggacgagagggggac
gtgggcaagttcctgctcaagggcaaccggcagatgacggagtcgtgtctcgccttctac
cagacccactttcccgacgcctactacctggagctgctgcgtaccggtcgaccggatgaa
gaggtctacctgcacatggcggtggccattgccaccgagttcgagctgccggtggtggcc
accaacgaggtggtgttcctcaacgccgaggacttcgacgcccacgagatccgggttgcc
atccacgatggttacaccctgatggacaagcgtcgcccgcgccgttacagcccgcagcag
tacctgcgcagccaggaggagatggccgagctgtttgccgacattcccgaagcgctggaa
aacacggtggagatcgccaagcgctgcaacgtgactgtgcgtctgggtgaatacttcctg
cccaatttcccgaccggcgacatgaccaccgaagactttctggtggccaaatccaaagag
ggcctggaagagcgtctcgccttcctgttcccggatccggccgtgcgcgccgtcaagcgc
ggcgagtatgacgagcgcctcgagatcgagctgaaagtcatcaaccagatgggcttcccg
ggttacttcctcatagtgatggagtttatccagtggtccaaggacaacggcatccccgtt
ggcccgggccggggctcgggggcgggttcactggtggcttacgcgctcaagatcaccgac
ctcgacccgctggaatttgacctgctgttcgaacgcttcctgaaccccgagcgggtctcc
atgcccgacttcgacgtcgacttctgcatggacagacgggacgaggtgatcgagcacgtc
tccgacatgtatggccgggatgcggtgtcgcagatcatcaccttcggcagcatggcggcc
aaggcggtggtgcgggacgtggggcgggtgctgggccatgcctatggtttcgtcgatcgc
atctccaagctgataccgccggatccgggcatgaccctggccaaggcgttcgaggccgag
ctcaagctgcccgagctctacgagcaggacgaggaggtcaaggacctcatcgacatggca
cgccggctggaaggcgtggtgcgcaacgccggcaaacacgccggtggcgtggtaatagcg
cctaccaagatcaccgactttgcgccgctctattgcgacgactccggcaatcaccctgtc
acccagttcgacaagaacgacgtggaatacgccgggctggtgaagttcgacttcctgggg
ctgcgtaccctgaccatcatcgactgggcgcttggcatgataaacccgcgccttgccaaa
gagggcaagccgccggtcgacatcgccgccatccccatccacgacaagaagtcgttcgat
ctgttgcagcggttcgagaccacggcggtattccagctcgaatcccgcggcatgaaggat
ctcatcaaacggctgcagcctgactgtttcgaagacatgatcgccctggtggccctgttc
cgtccgggcccgctccagtcgggcatggtggacaacttcatcgagcgaaagcacggcaag
gaggcgatctcctacccggacgagaagtggcaacacgagagtctcaaaccgatcctggag
cccacctacggcatcatcctctatcaggagcaggtgatgcagatagcccaggtgctggcg
ggttacaccctgggtggggcggacatgctgcgccgggccatgggcaagaaaaacccggcc
gagatggccaagcagcgatccgggtttgaggaaggggcggtcaagaacggcatcgacggc
gaactggcggtgaagatcttcgatctggtggagaagtttgcgggctacggcttcaacaaa
tcccactccgccgcctatgcgctggtctcctaccagaccctctggctcaagactcacttc
ccggccgagttcatggcagcggtcatgaccgccgatatggacaacaccgacaagatagtg
accctggtggacgaatgtcagcgcatggggctcaccgtcataccgccggatgtgaatacc
ggtcgctaccggttcagcgtcaacgaagatggccacatcgtctacggcataggggctgtg
aagggagtgggggaaggccctatcgacgccattctcagcgctcgggatcaggacggtccg
tttcgcgatctgttcgacttctgcaaccgggtcgacatcaagaagatcaacaagcgggtg
atggaaaaactcatcctctccggcgccatggacaggttaggtcctcaccgcgccgccctg
atggcgaccctggaagaggcgatgcgcgccgccgagcagcacgccaaggcacaggccgtg
ggtcaggtcgacatgttcggggtcttgacccaggagattgacgacgtcaagaaggcgttc
gccaacgtgccgcactggcctgacaaggtgtggctggaaggggagcgggagacgctcggc
ctttacctgaccggccaccccatcaaccagtacagcggcgaattgcgtcgctacacgtcc
ggccgtctgtgcgatctgcatcccacctcccgggatacggttaccacggcggcggggctg
gtgatcgcggcccgcagcatggtgaccaagcgtggcaacaagatggggatcttcaccctg
gacgacagatccggccgtctggatgtgactctgttcagtgaagcgctggaaaaatatgaa
gaattgatgcaaaaagaccgtattttggtggtttctggacaggtcagctttgatgacttc
tccggtggccttaaaatgtcggcccgtgaattactggatatcaacgatgcgagggagcgt
tttgccagggcaatccgcatctccctcgatgaacagcggattgatgatcgctttttcccg
cgtttgtgcgagattttggaacccgcccgtgccggagtctgtccggttcaggtaaactat
cgtcgccccggctcacgggtgcgactgacgctcggtaccgagtggcgggtgacgcccacc
gatcaactgatagatgacttgcgtgtcctgctgggacgagagcgggttgaattggttttt
gattag
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