Aeromonas salmonicida subsp. salmonicida A449: ASA_3471
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Entry
ASA_3471 CDS
T00500
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asa03016
]
ASA_3471 (truD)
Enzymes [BR:
asa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ASA_3471 (truD)
Transfer RNA biogenesis [BR:
asa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ASA_3471 (truD)
Prokaryotic type
ASA_3471 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
RTC4
Motif
Other DBs
NCBI-ProteinID:
ABO91439
UniProt:
A4SRB7
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All DBs
Position
complement(3760641..3761699)
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AA seq
352 aa
AA seq
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MLEQLSYLHGVPAAKGILKAEASDFVVVEDLGFEPCGEGEHIFVRVRKTGENTAWVAGLL
ADAAGVNRNAVTWAGLKDRHAVTEQWFGIHLPGKAEPDLSVVESDSIQILQARRHNRKLR
VGYLKGNHFTLRLTGLAQADGLEARLQAIATQGVPNYYGEQRFGRGGNNLEAAKAMFAGK
RIKDRNKRSLYLSAARSMLFNAIVSARIEQGLAHQLLAGDCVMLKGSHSIFSEEVLTPEL
AARLASGDVQLTASLWGRGRLASQGAAAEFEQAVLAPYAEWCDGLEKAGLDQDRRPLLLK
PEQMSWLLDGEVLTLSFFLPAGAFATSVVRELMQAEEADHGFRNQSDANSGQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgttggaacagctcagttatttgcatggtgtgcctgccgccaagggcattctcaaggcc
gaggccagcgattttgtggtggttgaggatctgggcttcgagccttgtggtgaaggtgag
cacatcttcgtccgggtgcgcaaaaccggcgagaacactgcctgggttgcgggcctgctg
gccgatgcagccggggttaaccgcaatgcggtgacttgggctggcctcaaagatcgccac
gctgtgaccgagcagtggttcggcatccacttgccgggcaaagccgagccggacttgtcg
gtggtcgagagcgacagcatccagattttgcaagccaggcgtcacaaccgcaaattgcgg
gttggctacctcaagggcaaccatttcaccttgcgcctcaccggtctggcgcaggccgac
gggctggaggcccgcctgcaagccatcgccactcagggggtgcccaattactatggcgag
cagcgtttcggccgggggggcaacaacctggaagcggccaaggcgatgtttgccggcaag
cggataaaggatcgcaacaagcgctccctctatctctccgccgcccgcagcatgctgttc
aatgccatcgtcagtgcccgcatcgagcaggggttggcccatcagctgttggccggcgat
tgcgtgatgctcaaaggcagccattccatcttcagtgaagaggtgctgacccctgagctg
gctgcacggctggcttccggtgacgtgcaactgaccgcctccctgtggggacgcggccgc
ctggcaagccagggcgctgccgccgagtttgagcaggcagtgctggctccttatgccgag
tggtgtgacgggctggaaaaagccggactggatcaggatcgccgcccgctgctgctcaag
ccggaacagatgagctggctgctggacggcgaggtgttgaccttgtccttcttcctgcct
gccggcgcctttgcgaccagcgtggtacgcgaattaatgcaggccgaagaggccgatcat
ggtttcaggaatcagtccgatgcgaattctggtcagtaa
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