Aeromonas salmonicida subsp. salmonicida A449: ASA_3958
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Entry
ASA_3958 CDS
T00500
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asa03021
]
ASA_3958 (rpoH)
Transcription machinery [BR:
asa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ASA_3958 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
2Fe-2S_thioredx
LysM3_NFP
Motif
Other DBs
NCBI-ProteinID:
ABO91910
UniProt:
A4SSN8
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All DBs
Position
complement(4251901..4252755)
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AA seq
284 aa
AA seq
DB search
MGTSLQRTMALIPQGSLEGYIQAVNSIPVLTAEEERELAERLQQGGDLEAARQLVMSHLR
FVVHVAKSYAGYGLPQADLVQEGNIGLMKAVKRFDPTVGVRLVSFAVHWIKAEIHEYVLR
NWRMVKVATTKAQRKLFFNLRKSKKRLGWFSHDEVQAVAAELGVSPTDVTEMEARMSNYD
QAFDLVGDDEDEGGFAPVHYLEDKSSDLAATIENDNWDDHATRRLSSALATLDERSQHII
RARWLDDDSKTTLQELADTYGVSAERVRQLEKNALKKLKDAMEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgggaacttcattgcaacgcactatggctctgattccgcaaggtagtctggaaggctat
atccaggcagtaaattcgattcctgtgctgactgcagaggaagagcgtgagctggctgag
cgtttgcagcagggtggcgatctcgaggctgcccgtcagctggtcatgtcgcacctgcgt
tttgtcgttcacgtcgccaagagttatgccggatacggtctgccccaggctgacctggtt
caggaaggcaacatcggcctgatgaaggcggtcaagcgctttgacccgaccgtcggagtg
cgactggtctccttcgccgtgcactggatcaaggccgagatccacgagtatgtcctgcgc
aactggcgcatggtaaaagtggccaccaccaaggcccagcgcaaactgttcttcaacctg
cgcaaatccaagaagcgtctgggctggttcagccatgacgaagtgcaggccgtcgccgcc
gagttgggggtctccccgaccgacgtgaccgagatggaagcgcgtatgagcaactacgat
caggcgttcgatctggtcggtgatgatgaagacgaaggtggctttgcccctgtccattat
ctggaagacaaatcctccgatctggcggccaccattgagaacgacaactgggacgatcac
gcgacccgtcgcctgagttcggcccttgccactctggatgagcgcagtcagcacatcatt
cgtgcccgctggctcgatgatgacagcaagaccacgctgcaggagctggccgacacctat
ggtgtctccgccgagcgggtgcgtcagcttgagaaaaacgcactcaagaagctgaaagac
gccatggaggcctga
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