Aeromonas salmonicida subsp. salmonicida A449: ASA_4020
Help
Entry
ASA_4020 CDS
T00500
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Pathway
asa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ASA_4020 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asa03400
]
ASA_4020 (recD)
Enzymes [BR:
asa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ASA_4020 (recD)
DNA repair and recombination proteins [BR:
asa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ASA_4020 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
AAA_11
Viral_helicase1
Helicase_RecD
SH3_13
UvrD-helicase
AAA_22
AAA_16
nSTAND3
AAA_28
CbiA
NTPase_1
SLFN-g3_helicase
SRP54
T2SSE
Motif
Other DBs
NCBI-ProteinID:
ABO91968
UniProt:
A4SSU6
LinkDB
All DBs
Position
complement(4315539..4317563)
Genome browser
AA seq
674 aa
AA seq
DB search
MIERLKALALAGRIRQLDLQFAKLVADLGGSPELVLGAALTCFELGRGHVCLQLEMLAAG
SLRPFGLDPQQSRDLLADLADPARWPALFAASPLVGTEQDDGLAPRWPLRLWHGRLYLTR
YHDHEQGVARHLRALSERAEWPEIAPALSRLFARDYGLVFGALLKARLAPDFSARHFIEK
YLDLVFPSEVDWPAIEGLLASAQAASDLDQLDALVPEALCCNGQKLAAATAAARPFAVIS
GGPGTGKTTTVAKLLAILVETGLQAGKAPAIRLVAPTGKAAARLTESIGSALQALDLPPE
WVEAIPTEAGTLHRLLGVIPGRSQFRHHAGNPLHLDLLVVDEASMVDLPMMARLLDALPS
HARLILLGDKDQLASVEAGAVLGDICSFIEQGISPAQADWLSRQTGYRLQGTPAGAPVRD
SLCLLAKSWRFDQHSGIGQLARACNSGDATAVESVWGMGFADISLHPWVGEAYNALIAQG
VAGYGAYLKAARAGEEPATVFKAFNSFQILCALRDGPFGVLGLNERLELALSRAGLIARD
GDWYAGRPVMVVRNDHGVGLYNGDMGLCLPDETGRLKVWFEQPDGTLRALLPSRLPPHET
VYAMTIHKSQGSEFAHTVLVLPDSPSPLLTRELVYTGITRAKACLDLYGDRALLAQAVRK
KTERYSGLAERLGE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaacggttgaaagcactggcgctggcggggcgtatccgccagctggatctgcaa
tttgccaagctggtggccgatcttggcggcagccccgagctggtgttgggggcggcgctc
acctgcttcgagctggggcgcggccacgtctgcctgcagcttgagatgctggctgccgga
tcattgcgcccgttcgggctggatccccagcagagtagggatctgctggctgatctggcg
gatcctgcccgctggcccgccctgtttgcggcaagcccgctcgttggtaccgagcaggat
gacgggctcgctccgcgctggccgctgcggctgtggcacgggcggctctacctcacccgc
taccacgatcacgaacagggggtggcccgccatctgcgagccttgagtgaaagagccgaa
tggccggagatagccccggccctgtcgcggctgtttgcccgcgactacgggctggtgttc
ggggcgctgctgaaagcccgcctagcccccgacttctcggcccgccactttatcgagaag
tatctcgacctggtgttcccgagcgaagtggattggcccgccatcgaagggctgttggcc
agcgcgcaggcggcgagcgatcttgaccagctggatgcgctggtgcccgaggcgctctgt
tgcaacggccagaagctggcggcggctaccgcggcggcgcgcccctttgccgtgatctcc
ggcggccccggcaccggcaagaccacgactgtggccaaactgctcgccattctggtggag
accggcctgcaagcgggcaaggccccggcgatccggctggtggcccccaccggcaaggcg
gcggcgcgtctcaccgagagtatcggctctgccctgcaggcgctggacttgccccccgag
tgggtggaagccatccccaccgaagcgggcaccttgcaccggctgctcggtgtgatcccg
gggcgcagccagttccgccaccacgcaggcaacccgctgcacctcgacttgctggtggtg
gatgaggcctccatggtcgacctgcccatgatggcgcgcctgctcgatgcgctgcccagc
cacgcccgcctgatcctgctcggcgacaaggatcagctcgcctcggtggaggcgggggcc
gtgctcggcgatatctgcagctttatcgaacagggcatcagccccgcgcaggcggattgg
ctctcccgccagaccggctaccgcttgcagggcacaccagcgggggcaccggtgcgtgac
agcctctgcctgctggccaagagctggcgctttgatcagcactccggcatcggccagctg
gcgcgcgcctgcaacagcggcgatgccactgcggtggaatcagtctggggtatgggcttt
gccgatatcagcctgcacccctgggtcggggaggcttacaacgccctgattgcccagggg
gtggccggttacggcgcttatcttaaggcggcccgcgcaggggaggagcccgcgaccgtg
ttcaaggcattcaacagcttccagatcctctgcgccctgcgcgatggcccgttcggggtg
ttgggtcttaacgagcgcctcgaactggccctgtcacgggccgggctgatcgcccgcgac
ggtgactggtatgccggtcgccctgtgatggtggtgcgcaacgaccacggggttggcctc
tacaacggcgatatggggctctgtctgcccgatgaaactggtcgcctcaaggtatggttt
gagcagccggatggcaccctgcgggcactcttgcccagccgcctgccacctcacgagact
gtctacgccatgaccatccacaaatcccagggctcggagtttgcccatacagtgctggtg
ctgcccgacagccctagcccgcttttgacccgcgagctggtctataccggcatcacccgg
gccaaggcgtgcctcgatctctacggcgatcgcgccctgctggcacaagcggtacggaaa
aagaccgagcgttattccggattggcggagaggttgggggagtga
DBGET
integrated database retrieval system
