Aeromonas salmonicida subsp. salmonicida A449: ASA_4021
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Entry
ASA_4021 CDS
T00500
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Pathway
asa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ASA_4021 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asa03400
]
ASA_4021 (recB)
Enzymes [BR:
asa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ASA_4021 (recB)
DNA repair and recombination proteins [BR:
asa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ASA_4021 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABO91969
UniProt:
A4SSU7
LinkDB
All DBs
Position
complement(4317599..4321219)
Genome browser
AA seq
1206 aa
AA seq
DB search
MANPLNTLRFPLHGERLIEASAGTGKTYTIAGLYLRLLLGHGPLIEEGADAGQPSAHERP
LSVTEILVVTFTEAATAELRGRIRARIHEARLAFLRGESKDVLLTQLLEEVEDHELAARR
LLAAERQMDEAAVFTIHGFCQRMLTQNAFESGALFETEFLTDDSQLRLQAVSDYWRAEFY
PVDKTLASSVRALWPSPAALLREMSSWLDNSELEILPALGDETLAARHQAAMARIEAVKN
GWLAQGDEIRRQTEGQIKLYTGKNYEGWLAKIGDWAQDPTSGYTLPKDLERFGQEALEAK
LSKGKALPTLPLFSEIDELLASRPGIRDLILQRAARVVRSRMQASKRQAHQLSFDDLLKD
LDGALGSSLGERLCDRIRATYRVAMIDEFQDTDPQQYRIFHRLYGGHKDTALLMIGDPKQ
AIYGFRGADIFTYIQARRNVSAHYTLGRNWRSSSALVGAVNGLFERAKDPFIYEADIPFL
PVEAQGKSKALVLDGATAPVLHCWQLAGQPTFNRGDYQSKMARATAAEIHRLLTLAREGK
AQIGDQAVKAGDIAVLVRTGAEGKLVQQELARLAIASVYLSNRESVLEQVEAREILLILH
ACQNPSEERSLRAALATGLFDLDAKALDALASDERAWESAVQEFMEYRKIWHRRGVLAML
RALLHRRNLASSLLASPYGERRLTNFLHLAELLQQVSSELDGEYALLRWLGEAVSRPSGQ
DAEQVLRLESERKLVQIVTIHKSKGLEYPLVFLPFICSHRTAETPLYHEADEAGNRTILD
LTGADSSLAEADKERLAEDLRLLYVALTRGVYATWLGLAPVRAGNGKSEKTDLHHTAIGY
LLQKGEEGDAETLATALTELSQALPGVAVGEPSLTRPAPLPVEQEQLGEPQVRHFTSSLE
RDWWISSYSGLAAQGNGHSKGVLANPGFDDEVATESASAAALLAESGEVAAPEPSIFTFP
KGARPGTLLHSLFETIDFQSAAGESLSHHIAALLAQDGFDEDWAPVLQQQVEAVLDTPLE
TGFGEPVRLRDLAPERKQVELEFFLPMGRVTAPALTALCQQHDPLSRGNKPLSFATVQGM
LKGFIDLVFEWQGRWYLLDYKSNHLGMSPADYSRPALERAMAEHRYDLQYLLYSLALHRL
LTLRLPGYDFEQHFGGVFYLFLRGMPQGGIFHTRPSRELVLGLDRLFSAGSESPAAGSHP
LNEVEA
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggctaacccgctcaataccctgcgctttcccctccacggtgaacgactgatcgaagcc
tctgccggtaccggcaagacctacaccatagccggtctctacctgcggttgctgttgggg
cacggcccgcttatcgaagagggggcggatgccggtcagcccagcgcccacgaacggccg
ctctctgtgaccgagatcctggtggtgacctttaccgaggcggccaccgccgagctgcgc
gggcggatccgcgcccgcatccacgaggcgcgcctcgcgtttttgcgtggtgagagcaag
gatgtgctgctgacccagctgcttgaagaggtggaggatcacgaactggcggcccgtcgc
ctgctggccgccgaacggcagatggacgaggcggctgtttttaccatccacggcttctgc
cagcggatgctgacgcagaatgccttcgagtcgggcgccctctttgaaaccgaatttctc
accgacgacagccagctaaggctgcaggcggtgagcgactactggcgcgccgagttctat
ccagtggataaaaccctcgccagctcggtgcgcgcgctctggcctagccccgccgccctg
ctgcgggagatgagcagctggctcgacaacagcgagctggagatactgcctgcgctgggg
gatgagaccctggccgctcgtcatcaggcggccatggcccgtatcgaggcggtgaaaaat
ggctggctggcgcaaggggacgagatccgccgccagacagaggggcaaatcaagctctat
accggcaagaactacgaaggctggctcgccaagatcggggactgggcacaggatccgacc
agcggttataccctgcccaaggatctcgagcgcttcggccaggaagcattggaggccaag
ctgagcaaggggaaggcgttaccaaccctgccgctgttcagcgagatcgacgaactgctg
gcgagccgccccggtattcgtgatctgatcctgcaacgggcggccagggtggtgcgcagc
cggatgcaggccagcaagcggcaggctcatcagctctcgttcgatgacctgctcaaggat
ctcgacggggccctcggctccagcctgggcgagcggctctgcgatcgcattcgcgccacc
tatcgggtggcgatgatcgatgaatttcaggataccgacccccagcagtaccgcatcttc
caccgtctttacggcggtcacaaagacacggcactcttgatgatcggtgaccccaaacag
gccatctacggttttcgcggcgccgacatctttacctacattcaggcgcggcgaaatgtg
agcgcccactacaccctggggcgtaactggcgctccagcagtgcgctggtcggcgcggtc
aacggcctgtttgagcgggccaaggatccctttatctacgaagcggatatccccttcctg
ccggtggaggcgcagggcaagagcaaggcgcttgttctcgatggcgccaccgcacctgtg
ctccattgctggcagctggcgggtcagcccaccttcaatcggggggattaccagagcaag
atggcgcgcgctaccgccgccgagatccaccgtctgctgaccctggcccgtgagggcaag
gcgcagataggcgatcaggcggtgaaggccggagatatcgccgtgctggtgcgtaccggt
gccgagggcaagctggtgcagcaggagctggcgcggctcgccatcgcctccgtctatctg
tcgaaccgcgagagcgtgctggagcaggtggaggcgcgggagattttgctgattttgcac
gcctgccagaacccgagcgaagagcgcagcttgcgggcggcgctcgccaccgggctgttc
gatctggatgccaaagcgctcgatgcgctagcctcggacgagcgggcgtgggagagcgca
gtgcaggagtttatggagtaccgcaagatctggcaccgccgcggcgtgctggccatgttg
cgggccctgctgcacaggcgcaatctcgcttcctccctgctggcgagcccctatggggag
cggcggctgaccaacttccttcatctggctgagctgctgcaacaggtgagcagcgagctg
gatggggaatatgccctgctgcgctggctgggggaggcggtgagccgcccgagcggccag
gatgcggaacaggtactgcgcctcgaatccgagcgcaaattggtgcagatagtcaccatc
cacaaatccaaggggctggagtacccgctggtgttcctgccctttatctgcagccacaga
accgccgagaccccgctctatcacgaggcggatgaagcgggcaatcgcaccattctcgac
ctgaccggcgccgactcgtcgcttgccgaagcggacaaggagcgcctcgccgaagacttg
cgactgctctacgtggcgctgacccggggcgtctacgccacctggctggggctggcaccg
gtgcgggccggtaacggcaagtcggagaagacagacctgcaccacaccgccatcggctat
ctgctgcaaaagggcgaagagggagatgccgaaaccctggcgaccgctttgaccgagctg
tcgcaggcgctgcccggggtggctgtcggtgagccctcgctcacccgtcccgccccgctg
ccagtggagcaggagcagcttggcgagccgcaggtgcgccactttaccagctcccttgag
cgggactggtggatcagctcctactcgggtctggcggcgcaaggaaatggtcacagcaag
ggggtgctcgccaatcccggcttcgatgacgaggtagccacagagtcggcgagcgcggct
gccttgctggccgagtcgggggaggtggcagcgcctgagccctccatcttcaccttcccg
aagggggcgcgtcccggcaccctgctccacagcctgttcgagaccatcgattttcagagt
gccgctggcgagtcgctgtcacaccatatcgctgccctgctggcgcaggatggcttcgac
gaggactgggcgcccgtgctgcaacagcaggtggaggctgtgctcgataccccgcttgaa
acaggctttggcgagccggtgcgactgcgggatctggcgcccgagcgtaaacaggtggag
ctggagttcttcctgcccatggggcgagtgacggcgccggcgctgaccgcgctttgccag
cagcacgacccgctgtcgcggggcaacaagccgctgagctttgccacagtgcaggggatg
ctcaagggctttatcgatctggtgttcgagtggcaggggcgctggtatctgctcgactac
aaatcaaaccacctcggcatgagcccggccgattacagccgaccggcgctggagcgggcc
atggccgagcatcgctacgacctgcaatacctgctctactcgctggcgctgcaccggctg
ctcaccctgcgcctgccgggctacgacttcgagcagcattttggcggtgtcttctatctg
ttcctgcgcggcatgccgcaggggggcattttccatacccgcccgagccgtgaactggtg
ttggggctggatcggttgtttagcgcaggcagtgagtcgccagcagcgggatcccaccca
ttgaacgaggtagaggcatga
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