Aeromonas salmonicida subsp. salmonicida A449: ASA_4194
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Entry
ASA_4194 CDS
T00500
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Pathway
asa03030
DNA replication
asa03410
Base excision repair
asa03420
Nucleotide excision repair
asa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASA_4194 (polA)
03410 Base excision repair
ASA_4194 (polA)
03420 Nucleotide excision repair
ASA_4194 (polA)
03440 Homologous recombination
ASA_4194 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asa03032
]
ASA_4194 (polA)
03400 DNA repair and recombination proteins [BR:
asa03400
]
ASA_4194 (polA)
Enzymes [BR:
asa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ASA_4194 (polA)
DNA replication proteins [BR:
asa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ASA_4194 (polA)
DNA repair and recombination proteins [BR:
asa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ASA_4194 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASA_4194 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABO92124
UniProt:
A4STA2
LinkDB
All DBs
Position
complement(4488875..4491631)
Genome browser
AA seq
918 aa
AA seq
DB search
MAPSNPLILVDGSSYLYRAFFASQQADLRTSTGLPSGAVRVMANMMRSLRKQYPDCHVAV
VFDAKGKTFRDDIYPEYKATRASMPDDLRSQVAPIHQMIKAMGFPFLMVEGVEADDVIGT
LARQATEKQLPVLISTGDKDMAQLVSDHVTLIDTMKDVKTDREGVIEKFGVPPELIIDYL
ALMGDKVDNIPGMTGVGEKTALALLQGIGSIDEIAANLDKVAALGFRGSKAFADKFREQE
EQVRLSYVLATIKTDVELEQSLEELQLGPIDKESLLAVYREYELRNLIKELESGGEESAG
QEEAGDDSAAPVAAIETDYRCILDEAEFDGWLEQLKVAPLFAFDTETTSLDYMEARIVGV
SFAVEAGKAAYVPFGHDYLGAPVQLTEAVVLGKLKPLLEDPTRLKVGQNLKYDRNVLLNH
DIDLQGIAYDTMLESYVLNSTASRHDMDSLAKRYLGVETTSFEDIAGKGVKQLTFNQIEL
EQAAPYAAEDADITLRLHQTLWGQLEAVPGLCQVFSEIELPLLPVLARMELLGTTIDPKL
LHQQSQEIELRLAELERQAHELAGQEFNLSSPKQLGEILFTKLGLPIIKKTPKGAPSTAE
EVLAELAETYELPRLLMEHRTLAKLKSTYTDKLPLMIKPQTGRVHTSYHQAVAATGRLSS
SDPNLQNIPVRNEQGRRIRQAFIPSAGYKLVAADYSQIELRIMAHLSGDKGLLTAFAEGK
DIHKATAAEVFGVALDAVTTDMRRSAKAINFGLIYGMSAFGLAKQLGIGRAEAQKYMDLY
FERYPGVLEYMERTRQQAEAQGYVETLFGRRLYLPDIKSRNAGLRKGAERAAINAPMQGT
AADIIKRAMINVDGWIRGIEDESIRMLMQVHDELVFEIREEKLEEYTAIIKEKMSAAAEL
HVPLLVEAGTGDNWDQAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggcccctagcaatccccttattctggtcgacggctcttcttatctttaccgcgccttc
ttcgcctcccagcaggccgatctgcgcacatcgaccggtttgccgagcggtgccgtccgt
gtcatggccaacatgatgcgcagcctgcgcaagcaataccctgactgccatgtggccgtg
gtgttcgacgccaagggcaagactttccgtgacgacatctatcccgagtacaaggcgacc
cgtgccagcatgccggacgatctgcgcagccaggttgccccaatccatcagatgatcaag
gcgatgggcttcccctttttgatggtcgaaggagtcgaggcggacgatgtgatcggcacg
cttgcccgccaggccaccgagaagcagctgcctgtgctgatcagtaccggcgacaaggac
atggcgcagctggtctccgaccatgtcaccctgatcgacaccatgaaagatgtgaagaca
gacagggaaggggtgattgagaagtttggcgtgccgcccgagctcatcatcgactatctg
gccctgatgggggacaaggtagacaacatccccggcatgacgggtgtcggcgagaagaca
gcgctggccctgctgcaggggatcggcagcatagacgagattgcagccaacctcgacaag
gtggcggccctcggttttcgcggttccaaggcgttcgccgacaagttccgtgagcaggag
gagcaggttcgcctttcctatgtactggcgaccatcaagaccgatgtcgagctggaacag
agtctggaagagctgcagcttggccccatcgacaaggagtcactgctggcagtctaccgt
gaatacgagctgcgcaacctgatcaaggaactggagtcaggtggcgaagaaagtgccgga
caggaagaggctggcgatgacagcgctgcaccggttgccgccatcgaaaccgactaccgc
tgcattctggacgaagccgagtttgacggctggctggaacagctgaaagtggcaccgctg
tttgccttcgataccgaaaccaccagtctcgactacatggaggcgcgcatcgtcggcgtt
tctttcgccgtcgaagcgggcaaggcggcctatgtgccgttcggtcacgactatctcggg
gcgccggtgcagctgaccgaggccgtagtgctgggcaagctcaagccgttgctggaagat
ccgacccgtctcaaggtgggtcagaacctcaagtacgatcgcaacgtgttgctcaaccac
gacatcgacctgcagggtatcgcctacgacaccatgctcgagtcctacgtgctcaactcc
accgccagtcgtcacgacatggattcgctggccaaacgctatctcggggtcgaaaccacc
tcttttgaagatatagcgggcaaaggggtcaagcagctcaccttcaaccagattgagctg
gagcaggcagccccctatgcggcggaagatgcggatatcaccctgcgtctgcaccagacc
ctgtggggccaactggaagccgtgcctggcctgtgccaggtattcagcgaaatcgagctg
ccgctgctgccggtactggcgcggatggaattgctcgggaccaccatagatcccaagctg
ctgcatcagcagagccaggagatagagctgcgtctggccgaactggagcgtcaggcccat
gagctggccgggcaggagttcaacctctcctcgcccaagcagctgggggagatcctcttc
accaagctgggtctgccgatcatcaagaagaccccaaaaggtgcaccatccaccgcggaa
gaggtgctggccgaactggccgagacctacgagctcccgcgcctgctgatggagcaccgc
accctggccaagctcaagtccacctataccgacaagctgccgctgatgatcaagccccag
acagggcgggtacacacctcctatcatcaggcggtggcggccaccggccgtttgtcctcc
tctgatcccaacctgcaaaacattccggtgcgcaacgagcagggtcgccggatccggcag
gccttcatcccgagcgccggttacaagctggtggcggcagactactcccagatcgagctg
cgcatcatggcgcacctctccggtgacaaggggctgctgaccgcgtttgccgagggcaag
gacatccacaaggcgacggccgccgaggtgttcggggtcgcgctcgatgcggtgaccacc
gatatgcgtcgcagtgccaaggcgatcaacttcggcctcatttatggcatgagcgccttt
ggcctggccaaacagctggggatcggtcgcgccgaggcgcagaagtacatggacctctac
ttcgaacgctacccgggtgtgctggagtatatggagcgtacccgccagcaggcggaagcg
cagggctatgtcgagaccctgttcggccgtcgtctctatctgccggatatcaagtcccgc
aacgccggtctgcgcaagggtgccgagcgggcggcgatcaacgcccccatgcaggggacg
gccgccgacatcatcaagcgcgccatgatcaacgtagatggctggatccgcggcatcgag
gatgagtcgatccgcatgctgatgcaggtacacgatgaactggtgttcgagatccgcgaa
gagaagctggaagagtacactgccatcatcaaggagaagatgtcggccgctgccgaactg
catgtacccctgctggtcgaagcgggtacgggcgacaactgggatcaggcccattaa
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