Aeromonas sanarellii: KXJ75_13030
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Entry
KXJ75_13030 CDS
T08465
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
asaa
Aeromonas sanarellii
Pathway
asaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KXJ75_13030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asaa03019
]
KXJ75_13030
03400 DNA repair and recombination proteins [BR:
asaa03400
]
KXJ75_13030
Enzymes [BR:
asaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KXJ75_13030
Messenger RNA biogenesis [BR:
asaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KXJ75_13030
DNA repair and recombination proteins [BR:
asaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KXJ75_13030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXW27826
LinkDB
All DBs
Position
2727806..2729728
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AA seq
640 aa
AA seq
DB search
MITSLLSRHFGFDRLRPGQEAVISRLLAGKSAAAIFPTGAGKSLCYQLPALALPHLTLVI
SPLIALMHDQLAFLQRKGIAAATLDSSQTPEESRRVMQQASDGRLKILMISVERLKNERF
RRFIAQIPLSLLVVDEAHCISEWGHNFRPDYLKLPDHRRELAIPQVLLLTATATPAVMAD
MQAKFGIDGDDLVVTGFYRPNLDLAVIPLAGSARDAWLREELHRDPAAPTIVYVTLQHSA
EQCAAQLQASGIRACAYHAGLDPALRSQIQHDFMAGRLDCIVATIAFGMGIDKADIRRVI
HYDLPKSIENYSQEIGRAGRDGLPSRCTVLASRVQLPVLENFVYGDTPDRTAILRLLGIL
QEAGSEWEFGLLRLSNETNIRQLPLKTLLVYLEMAGIIAPAYNYFAEYRFRFVLEKQAIL
ARFDPKRRQFLEQVFACAPQARTWCTMDFEVLWQGYQGERQRAAAALDYLQQQDWIELES
KQMTEVYRVLRQGIDVASLADQLHALFEQKEQSELARLQALLTFFSSTTCLSHELARYFA
DDAAPERCGHCSVCRGEVALLPPLPTPALPNEHGLRAWCDPLVALCRSRDPRLLTRFLCG
IATPLTTRLKARSLAGFGQLAAHPFADVLAAVSRLYPDES
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctctttgttaagccgacacttcggtttcgatcgcttgcgacccgggcaggaa
gcggtgatcagccgcctgctggccggcaagagtgcggccgccatctttccgaccggggcc
ggcaagtccctctgctatcagctacccgccctcgccctgccccacctgactctggtgatc
tctccgctgatcgccctgatgcatgatcagctcgccttcttgcagcgcaaggggatcgcc
gccgcgaccctggactccagccagacgccggaggagagccggcgcgtgatgcagcaggcc
agcgatggccggctcaagatcctgatgatctcggtggagcgcctcaagaacgagcgcttt
cgccgcttcatcgcccagatccccctgtccctcctggtggtggacgaggcgcactgcatc
tcggagtggggccacaactttcgccccgattacctgaagctgccggatcatcgccgcgag
ctggccattccccaggtgctgctgctgaccgctaccgccaccccggcggtcatggccgac
atgcaggccaagttcggcatcgacggggacgatctggtggtgaccggcttctatcgtccg
aacctggatctggccgtcatcccgctggccggcagcgcccgcgacgcttggctgcgcgag
gagctgcaccgggatccggccgcccccaccatcgtctatgtgaccctgcagcacagtgca
gagcagtgcgccgcgcagttgcaggccagcggcatccgggcgtgtgcctaccatgcgggg
ctggatcccgccctgcgcagccagatccagcacgacttcatggcgggcaggctagactgc
atcgtcgccaccatcgcctttggcatgggcatcgacaaggccgacattcgccgggtcatt
cactacgatctgcccaaatccatcgagaactacagccaggagataggccgcgccgggcgc
gatggcctcccctcccgctgcaccgtgctggcaagccgtgtccagttgccggtactggaa
aacttcgtctatggggatacacccgaccgcaccgccatcttgaggctgctcgggatcctg
caagaggctggcagcgaatgggaatttggtctgctgcgcctctccaacgagaccaacatc
cgccagttgcccctcaagaccctgctggtctatctggagatggcgggcatcatagcgccg
gcctacaactactttgccgagtaccgcttcaggttcgtgctggaaaagcaggcgatcctg
gcccggttcgatcccaagcgccgccagtttctggagcaggtgtttgcctgcgccccccag
gcgcgcacctggtgcaccatggacttcgaggtgctgtggcaaggctatcagggggaacgc
cagcgcgccgcggcagcgctggattatctgcagcagcaggactggatagagcttgaaagc
aaacagatgaccgaggtgtatcgggtgttgcgccaggggatcgacgtggcgtcgctggca
gatcagctccatgccctgttcgagcaaaaagagcagagtgaactggcccggctgcaagcc
ctgctgaccttcttctcctcgaccacctgtctcagccatgagttggcccgctattttgcc
gatgacgcggcccccgagcggtgcggacactgctccgtttgccggggagaggtcgcccta
ttgcccccgttgccgacgcccgccctgccgaacgagcatggcctgcgcgcctggtgcgat
cccctggtggccctgtgtcgcagccgggatccccgcctgctgacccgcttcctgtgcggc
atcgccaccccgctgacaacccggctcaaggccaggagcctggccggttttggccagctg
gcggcccatcccttcgcggacgtgctggcggcggtctcccgcctctatcccgacgaatcc
tga
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