Aeromonas sanarellii: KXJ75_14370
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Entry
KXJ75_14370 CDS
T08465
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
asaa
Aeromonas sanarellii
Pathway
asaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KXJ75_14370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asaa03019
]
KXJ75_14370
03009 Ribosome biogenesis [BR:
asaa03009
]
KXJ75_14370
Enzymes [BR:
asaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KXJ75_14370
Messenger RNA biogenesis [BR:
asaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KXJ75_14370
Ribosome biogenesis [BR:
asaa03009
]
Prokaryotic type
rRNA helicases
KXJ75_14370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QXW28015
LinkDB
All DBs
Position
complement(3020598..3022511)
Genome browser
AA seq
637 aa
AA seq
DB search
MSDTEQLPLFSELGLAAPVLKALQDVGYERPSPIQAAAIPHLMAGHDLLGQAQTGTGKTA
AFALPLLSRLEAGNRNTQILVLAPTRELALQVAEACQRYAHHMPDFHVLPIYGGASYETQ
TRALRRGAQVVVGTPGRVMDLIRRKNLDLSGLKALVLDEADEMLRMGFIDDVDWIMDQCP
AGRQVALFSATMPEQIRRVAQKHLKQPKEIKIASKTATATTIRQRYWQVTGLHKLDAMTR
LLEVESYEALLVFVRTKNAAEELAGKLAARGHACEALHGDIPQKLRERTVDKLRQGQLDI
LIATDVVARGLDVERITHVVNYDIPYDTESYVHRIGRTGRAGRKGEAILFVAPRERRMLR
AIEHATRQAIEPMKMPSTEDINQHRLAKFKERIRETMMGEELEIYHNLVNELIEEDSADP
LELAAALAKLVQGDQPLLLDDSIPDPLLNAGNDRGGFERREFNDRGGRDFGNRDFGDRGD
RPARRMPSLEPRPLKDNPDVEMERYRVDVGAHHGVKPGQIVGAIANEANIESRFIGNIDI
ADDFSTVDLPKGISAEVLEVIKKARVCQRPLQITRYTEVPAGSNTAPRPPRGDRPFNKER
PFNKDRRPSGDRPFNKGGERREGGFNKDRKFSKRRDS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataccgaacaactgcccctttttagtgagcttggactggccgcgcccgtattg
aaagcgctgcaggacgtgggctatgagcgcccgtcccccatccaggccgcagcaattccc
cacctgatggcgggacacgatctgctggggcaggcgcaaaccggtacagggaagaccgct
gcctttgccttgcctctgttgtctcgtctggaagctggtaaccgcaacacccagatcctg
gtgctggcgccgacccgcgaactggccctgcaggtggctgaagcgtgccaacgctatgcc
caccacatgcccgatttccacgtgctgcccatctacggcggcgcctcctatgaaacccag
acccgcgccctgcgccgcggtgcccaggtggtcgtcggtaccccgggccgcgtgatggac
ctgatccgtcgcaagaacctggacctctccggcctgaaggccctggtgctggacgaagcg
gacgaaatgctgcgcatgggcttcatcgacgacgtggactggatcatggatcagtgcccg
gccggtcgtcaggtcgcgctcttctccgccaccatgccggagcagatccgtcgtgtggcc
cagaagcacctgaagcagcccaaagagatcaagatcgcctccaagactgctaccgccacc
accattcgccagcgttactggcaggtgaccggtctgcacaagctggacgccatgacccgt
ctgctggaagtggaatcctacgaagccctgctggtgttcgtgcgtaccaagaacgccgcc
gaggagctggctggcaagctggccgcccgcggtcacgcctgtgaggcgctgcacggcgac
atcccgcagaagctgcgtgagcgcaccgtcgacaagctgcgtcagggccagctggacatc
ctgatcgccaccgacgtggtcgcccgtggtctggacgtcgagcgcatcacccacgtggtg
aactacgacatcccctacgacaccgaatcctacgtgcaccgtatcggccgtaccggtcgt
gccggtcgcaagggcgaggccatcctgttcgtggctcctcgcgaacgccgcatgctgcgc
gccatcgagcacgccacccgccaggccatcgagccgatgaagatgccgagcaccgaggac
atcaaccagcaccgtctggccaagttcaaggagcgcatccgcgagaccatgatgggcgag
gaactcgagatctaccacaacctggtgaacgagctgatcgaagaggattccgccgatccg
ctggagctggctgccgcgctggccaagctggtgcagggcgatcagccgctgctgctggac
gactccatcccggatccgctgctgaatgccggcaacgatcgcggtggcttcgagcgccgt
gagttcaacgaccgcggtggtcgtgacttcggcaaccgtgacttcggtgaccgcggcgat
cgcccggcccgtcgcatgccgtccctggagccgcgtccgctcaaggacaacccggacgtg
gagatggagcgctaccgcgtggacgtgggtgcccatcacggcgtcaagccgggccagatc
gtcggcgccatcgccaacgaggcgaacatcgagagccgcttcatcggcaacatcgacatc
gccgacgacttctccaccgtcgacctgcccaagggcatcagcgccgaggtgctggaggtg
atcaagaaggcccgtgtctgccagcgtccgctgcagatcacccgctacaccgaagtgccg
gccggcagcaacactgccccccgtccgccccgtggtgaccgccccttcaacaaggagcgt
cctttcaacaaggatcgccgtcccagcggtgaccgtcccttcaacaagggtggggagcgc
cgtgaaggtggcttcaacaaggatcgcaagttcagcaagcgccgcgacagctga
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